Ectobacillus sp. JY-23: MUG87_12185
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Entry
MUG87_12185 CDS
T09162
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ecto
Ectobacillus sp. JY-23
Pathway
ecto00521
Streptomycin biosynthesis
ecto00523
Polyketide sugar unit biosynthesis
ecto00541
O-Antigen nucleotide sugar biosynthesis
ecto01100
Metabolic pathways
ecto01110
Biosynthesis of secondary metabolites
ecto01250
Biosynthesis of nucleotide sugars
Module
ecto_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecto00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
MUG87_12185 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MUG87_12185 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MUG87_12185 (rfbC)
Enzymes [BR:
ecto01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MUG87_12185 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
UPF0047
Motif
Other DBs
NCBI-ProteinID:
UOY91310
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Position
complement(2366212..2366769)
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AA seq
185 aa
AA seq
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MNIVKTKIEDVVILEPKVFGDHRGYFMESYNKDLFEQLGLTQDFIQDNQSLSVPVGTLRG
LHFQLNPKAQTKVVRCVTGAIYDVAVDIRKGSPTYGQWVGVILSEHNKRQLVVPKGFAHG
FCTLVPNTTVAYKVDEYYSPEHDAGILWNDPALSIDWPASNPILSEKDTKHPVLAEAEIN
FVYEK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgtcaaaacaaaaattgaggacgtagtcattttagaaccaaaggtttttggt
gaccatcgcggttattttatggaaagctataacaaagacctgtttgaacaattagggctg
acccaggattttatccaagataatcaatccctgtctgtaccggtcggcacattacgtggc
ttgcattttcagttaaatccgaaggcacagacaaaagtagtgcgctgtgtaacaggagcg
atttatgatgtggcagttgatattcgcaaaggctctcctacttatggtcaatgggtaggt
gtaattttgagtgagcataacaagcgtcagcttgttgtaccaaaaggttttgcgcacggc
ttctgcacattggtacctaacacaacagttgcctacaaggtagatgaatattactctcct
gagcatgatgcaggcattctttggaacgacccagcactgagcattgattggccagcaagc
aacccaattttatcggaaaaagacacaaagcatcctgtattagcagaagcagagattaac
ttcgtatacgagaaatag
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