Encephalitozoon cuniculi: ECU01_0670
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Entry
ECU01_0670 CDS
T00105
Name
(RefSeq) TFIIH/NER complex subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03022
Basal transcription factors
ecu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ECU01_0670
09124 Replication and repair
03420 Nucleotide excision repair
ECU01_0670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecu03021
]
ECU01_0670
03400 DNA repair and recombination proteins [BR:
ecu03400
]
ECU01_0670
Transcription machinery [BR:
ecu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ECU01_0670
DNA repair and recombination proteins [BR:
ecu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ECU01_0670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Corona_NS1
Motif
Other DBs
NCBI-GeneID:
860242
NCBI-ProteinID:
NP_001402152
LinkDB
All DBs
Position
I:83991..85235
Genome browser
AA seq
414 aa
AA seq
DB search
MPSEVSQAWPYPIDIIEYFEMLPRHSKTQLYGAPIFAVSFLKVFDEKTTKFVFDLLLKSH
SISSLREIEGIKETLKILLRIQVIGKKGNNIYLDEGFRRSLMDGFCMLTMERHYRSIGEK
VEMDESESSRKFEAILGSVVNRECRIEAFGVSEVLMFGGLLGRDRNITNRGFEFLLKTKK
EQLWCLVLLSLKYFLGSVEEEIAVLEALFELSARAVGTVYRQVDQMDRRLFKYLEALGIL
RLYEKGLAIGRSFVQLFEASERNRREFIIVETNNKIYAYTNSEYEKSVIHLFCNVTVNLP
NLIKGIITEESVNVAFDKGITGKQIIHFLEASVRQGSLPPAIRNQIVIWESKRNRIFMVP
GYLYSNFLNLSDYQKVLEFCIRGNHLVESDVDKRMIVVKLEGHSLVKEFVKTIL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcgaagtctcccaagcatggccatatccaatagacatcatcgaatacttcgaa
atgcttccgagacactcgaagacacagctgtatggagcgccgatctttgcagtgtcgttt
cttaaggtctttgacgagaagaccacaaaatttgtcttcgacctactactgaagtctcac
tccataagctcgctaagggagatagagggaatcaaggagactttgaagatactgctaagg
atccaggtgatcggaaagaaaggaaacaacatatatctggatgagggtttcagaaggtcg
ttaatggacgggttttgcatgcttacgatggaaaggcactacaggagcattggtgagaag
gtggaaatggatgagtcggaaagcagcagaaaatttgaggctattctggggtctgtcgtc
aacagggagtgcaggatagaggcgtttggggtctcggaggttcttatgtttggagggctc
cttggcagggacagaaacattaccaacagaggatttgagtttcttctgaagacaaaaaag
gagcagctgtggtgtcttgtgcttctatccctgaagtactttctcgggtctgtggaagag
gagatagctgtgcttgaggcgctgtttgagctaagcgcaagggccgttggaactgtgtat
cgccaggtcgaccagatggacaggagactgtttaagtacttggaggcgctgggaatactg
aggctttatgaaaaaggtcttgcaattggaagatcctttgtacagctgttcgaggcatcg
gagcgcaacaggagggagtttataatagtggagacgaacaacaagatatatgcatacaca
aactccgaatacgaaaagtctgtaatacatttgttctgcaatgtgactgtcaatcttccg
aacctgatcaagggaatcataacggaggagagcgtgaatgttgcattcgacaagggaata
accggaaagcagataatccattttttggaggcaagtgtcagacaaggaagcctgcccccg
gcaattaggaaccagatagtgatatgggagtcgaagagaaacaggattttcatggtgcct
ggatacctgtattcgaacttcctgaatctgtcagactatcagaaggtactagaattctgc
attagaggaaaccacctggtggaatcggatgttgacaaaagaatgatagttgtgaagctg
gaggggcatagcctcgttaaggagttcgtaaagactatactctag
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