KEGG   Encephalitozoon cuniculi: ECU02_1220
Entry
ECU02_1220        CDS       T00105                                 
Name
(RefSeq) uncharacterized protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ecu  Encephalitozoon cuniculi
Pathway
ecu03030  DNA replication
ecu03410  Base excision repair
ecu03420  Nucleotide excision repair
ecu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ecu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ECU02_1220
   03410 Base excision repair
    ECU02_1220
   03420 Nucleotide excision repair
    ECU02_1220
   03430 Mismatch repair
    ECU02_1220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ecu03032]
    ECU02_1220
   03400 DNA repair and recombination proteins [BR:ecu03400]
    ECU02_1220
Enzymes [BR:ecu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ECU02_1220
    6.5.1.6  DNA ligase (ATP or NAD+)
     ECU02_1220
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     ECU02_1220
DNA replication proteins [BR:ecu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    ECU02_1220
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     ECU02_1220
DNA repair and recombination proteins [BR:ecu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ECU02_1220
   NER (nucleotide excision repair)
    Other NER factors
     ECU02_1220
   MMR (mismatch excision repair)
    Other MMR factors
     ECU02_1220
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 858637
NCBI-ProteinID: NP_584647
UniProt: Q8SSE3
LinkDB
Position
II:143949..145718
AA seq 589 aa
MSKILFADFCTVLEKISMTSKRLEIQSIFTDYLRNIRETHPPSMAPALYLSIATVYPEYF
NKELGVGENALVGIVAEVTGKSSKGVRNEYSKEGDLGTIAMRCRVSQLLIPKTQLEVMDV
FLGMRRVANEEGPRSSSSKKRIILGMMVKCSPLESKYLIRLIEGRLKIGLALKTVLISLA
NVFSDDKIDEIKAAFNRQPDIGRLADCLLEHGVEGLSTKFQVTPGIPLKPMLSNPSKDLT
SAFKRVENKSFTCEYKYDGERVQIHRFDSSVETFSRNSEKTTEKYPDLMGLYDVSDRDFI
VDGEIVAYNQKERRILPFQVLTTRKRKRVESNKIEVHVCVFVFDLIYFDGRSWIDEPLEE
RRRVLHSSFKEIDGKFHFAEFKDCETPEEAETFFNKSVENNFEGMMIKTLGSDATYLPSQ
RSNKWIKIKKDYLESMSDSLDLVVMGAYYGKGRRAGFYGGFLLGVYNDEEEKFEALCKIG
TGFDDSILSKLHEQLSSSLCSAPKNYSYKESVKPDVWVEAKYVWEVRAAGISLSPIYSAA
WSKGEKGISLRFPRFIRERDDKDVREATTSSQAYQMYLDSKVEHSEEFY
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgagcaaaattttgtttgccgacttctgtaccgtattggagaaaataagcatgacgtcc
aagcgcctggagatccagtccattttcacggattatctgagaaacatacgtgaaactcac
ccaccttccatggctccagccctgtatttgtccattgcaacggtatacccggaatacttc
aacaaggagttgggcgtcggagagaatgcactggtggggattgttgcagaggtcacagga
aagtccagtaaaggtgtcagaaatgagtattcaaaagaaggggatctgggaaccatagcc
atgaggtgcagagtgtcgcagctgcttataccaaagacgcagttggaagtgatggatgtg
tttcttggaatgagaagggtagcaaacgaggaaggacctcgatcctcctcctcaaagaag
aggatcattcttgggatgatggtcaaatgctcgcctctggagtcgaagtacctgataagg
ctgatcgagggaaggcttaagatagggcttgcgcttaaaacagtgctgatcagccttgca
aacgtcttttctgacgacaagattgatgagatcaaggctgccttcaacagacagccggat
ataggaagattagcagactgtctacttgagcatggggtggaagggctttcaaccaagttc
caggttacgccaggaatccctctgaagccgatgttgtcgaatccttccaaggacctaacg
tcagccttcaaaagggttgagaataagagctttacttgcgagtacaaatacgatggagaa
agggtccagatccacaggtttgatagcagcgtggagacgtttagtagaaactccgagaag
acgacggagaagtatcctgacctaatgggtctctacgacgtatcggacagagacttcatt
gtcgatggcgagattgtggcatataaccaaaaagagaggaggatccttccgttccaagtg
ctgactacaagaaaaaggaagagggtcgaaagcaacaagatagaggtccatgtatgcgtg
tttgtgtttgatctaatatattttgatggaaggtcctggattgacgaacccttggaggaa
aggcgaagagtactccacagctcgttcaaagaaatcgatgggaagtttcattttgcagag
tttaaggattgcgagacaccagaggaggcagaaacattcttcaataagtctgtagagaat
aactttgagggtatgatgataaagactctggggtctgatgcaacatacctgccgtcgcag
agaagcaataaatggataaagatcaaaaaggattatctggagagcatgtccgactccttg
gacctggttgtgatgggggcatactatggaaagggaaggagggccggattctacggggga
tttctgcttggtgtgtataatgacgaggaggagaagtttgaggccctgtgtaagatagga
actggatttgacgacagtatcctctcaaaacttcatgaacagctgagcagtagcctgtgt
agtgctcccaagaactactcatacaaagagtctgttaagccagacgtttgggtcgaggct
aaatatgtgtgggaggtcagggcagcagggatatccctatcgccgatatacagtgctgca
tggagtaaaggcgagaagggaatatcgctaaggttccccagattcataagagagagggac
gataaagacgttagggaagcgaccacgtcctcgcaagcatatcaaatgtatctggactca
aaggtcgagcactcggaagagttctactga

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