Encephalitozoon cuniculi: ECU04_0280
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Entry
ECU04_0280 CDS
T00105
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ecu
Encephalitozoon cuniculi
Pathway
ecu03022
Basal transcription factors
ecu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ECU04_0280
09124 Replication and repair
03420 Nucleotide excision repair
ECU04_0280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecu03021
]
ECU04_0280
03400 DNA repair and recombination proteins [BR:
ecu03400
]
ECU04_0280
Transcription machinery [BR:
ecu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ECU04_0280
DNA repair and recombination proteins [BR:
ecu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ECU04_0280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
Tfb4
VWA
Motif
Other DBs
NCBI-GeneID:
858859
NCBI-ProteinID:
NP_584711
UniProt:
Q8SVX5
LinkDB
All DBs
Position
IV:34170..35192
Genome browser
AA seq
340 aa
AA seq
DB search
MAKQFSWEQEYKRTWEDRNDRKVNEFNLETEAPYSNNRKGIVRHLHIIIDVSEAIDKSDF
LPTFRANVTKVLEGFIPSFYSENPLSTLSFLSIRDVCVKYTSSMDIDIHAFLGQTGSKWF
SLLNGLEGSIEVMKNTMHVKEILVIVASTSTRDPHGYAEVLAKLRAYNIKVHFISLCGEI
TLYKSISKATEGRFYVPVDAGHLSAIMRELSHPTDFNGTKLSLVKIGFPSPMMEPSVCAC
HLEVKGAGYECPVCKTMVCSLPISCPICSTQLVSTLNLSKSLRFLYPLRPFVEKAEGTCR
VCQGKGAYQCELCKSTFCSYCNRLIHNTLSFCIYCELPHN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagttttcttgggaacaggagtacaagaggacgtgggaggacaggaacgat
aggaaggtaaacgaatttaacctggaaacagaggcgccttacagcaacaatcgaaagggg
atagtgaggcatcttcacataataatagacgtttcagaggcaatagacaagtcagacttc
ctccctacgttcagggcaaacgtgacaaaagtcctcgaggggtttatcccctcgttctac
agtgaaaatcccctgtccaccctctcctttctcagcattagagacgtgtgtgtgaagtat
acaagcagtatggacatagacattcatgcatttcttgggcagacgggatcgaagtggttt
tcattacttaacgggcttgagggatccatagaggtcatgaagaataccatgcacgttaag
gagatccttgtgattgttgcaagtacatccaccagagatccccatggatatgctgaggta
ctggccaaactgagggcatacaacataaaggtccacttcataagcctgtgcggcgagatc
actctgtataaatcaatatcaaaggccaccgaggggaggttctatgttccggtcgatgca
ggccatctttctgcaatcatgagggaattgtcccaccccacagacttcaatgggacaaaa
ctcagcctggttaagatagggttcccctcgccaatgatggagccatctgtgtgtgcctgc
catctagaagtaaaaggtgctgggtatgaatgcccggtctgcaaaacgatggtctgctct
cttcccatttcgtgcccaatatgtagcacccagcttgtatccacactgaatctttcaaag
tctctgcggtttctttatccgctaagaccatttgttgagaaggcagagggtacatgcaga
gtgtgccaaggaaagggagcataccaatgcgagctctgtaaaagcacattctgcagctat
tgcaacagactcattcacaatacccttagcttttgcatctactgcgaattaccccataac
tag
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