Escherichia coli APEC O1 (APEC): APECO1_2562
Help
Entry
APECO1_2562 CDS
T00425
Symbol
rhaR
Name
(GenBank) DNA-binding transcriptional activator, L-rhamnose-binding
KO
K02854
AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecv03000
]
APECO1_2562 (rhaR)
Transcription factors [BR:
ecv03000
]
Prokaryotic type
Helix-turn-helix
AraC family
APECO1_2562 (rhaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AraC_binding
HTH_18
HTH_AraC
Cupin_2
ARD
Motif
Other DBs
NCBI-ProteinID:
ABJ03373
UniProt:
A1AI83
LinkDB
All DBs
Position
4407532..4408470
Genome browser
AA seq
312 aa
AA seq
DB search
MAFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFASDQQAVAVADRYPQDV
FAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYC
PERLKLNLDWQGAIPGFNASAGQPHWRLGSVGMAQARQVIGQLEHESSQHVPFANEMAEL
LFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLR
QQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMT
PSQWRHLNSQKD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctttctgcaataacgcgaatcttctcaacgtatttgtacgccatattgcgaataat
caacttcgctctctggccgaggtagccacggtggcgcatcagttaaaacttctcaaagat
gatttttttgccagcgaccagcaggcagtcgctgtggctgaccgttatccgcaagatgtc
tttgctgaacatacacatgatttttgtgagctggtaattgtctggcgcggtaatggtctg
catgtactcaacgatcgcccttatcgcattacccgtggcgatctcttttacattcatgct
gacgataaacactcctacgcttccgttaacgatctggttttgcagaatattatttattgc
ccggagcggctgaagctgaatcttgactggcagggggcgattccgggatttaacgccagc
gcagggcaaccacactggcgtttaggtagcgtggggatggcgcaggcgcggcaggttatc
ggtcagcttgagcatgaaagtagtcagcatgtgccgtttgctaacgaaatggctgagttg
ctgttcgggcagttggtgatgttgctgaatcgccatcgttacaccagtgattcgttgccg
ccaacatccagcgaaacgttgctggataagctgattacccggctggcggccagcctgaaa
agtccctttgcgctggataaattttgtgatgaggcatcgtgcagtgagcgcgttttgcgt
cagcaatttcgtcagcagactggaatgaccatcaatcaatatctgcgacaggtcagagtg
tgtcatgcgcaatatctcctccagcatagccgcctgttaatcagtgatatttcgaccgaa
tgtggctttgaagatagtaactatttttcggtggtgtttacccgggaaaccgggatgacg
cccagccagtggcgtcatctcaattcgcagaaagattaa
DBGET
integrated database retrieval system
