Escherichia coli APEC O1 (APEC): APECO1_4371
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Entry
APECO1_4371 CDS
T00425
Symbol
yejH
Name
(GenBank) putative ATP-dependet helicase
KO
K19789
DNA repair protein RadD
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecv03400
]
APECO1_4371 (yejH)
DNA repair and recombination proteins [BR:
ecv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
APECO1_4371 (yejH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
UPF0547
AAA_16
SLFN-g3_helicase
zf-tcix
zinc_ribbon_2
zf-ribbon_3
AAA_22
DZR
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
ABJ01581
UniProt:
A0A0H2Z194
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All DBs
Position
2393372..2395132
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AA seq
586 aa
AA seq
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MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHEKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVTRNLDAFQGEFSLLIVDECH
RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGSERDVLIDDFKAQR
FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMS
LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA
ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacactccgcccatatcagcaagaagccgtggatgccacgctcaaccatttt
cgtcgtcataaaacccctgccgtaatcgtgctgcccaccggtgcaggtaaaagcctggtg
atagcggaactggcgcggctggcgcgtggtcgcgtgctggtgttggcacacgttaaagaa
ctggtggcacaaaaccatgaaaaatatcaggcgctggggctggaagccgatatttttgcc
gccgggctaaagcgcaaagagagccacggtaaagttgtatttggcagcgtgcagtcggtc
acccgtaatcttgatgcctttcagggtgaattttcgctgttgattgtcgatgaatgccac
cgtattggtgacgatgaagagagccagtatcagcaaatcctcactcacctgaccaaagtg
aatccccacttacgcctgctggggctgactgccacgccttttcgactgggcaaaggctgg
atttatcagttccattatcacggcatggtacgcggcgatgagaaagcccttttccgtgac
tgcatttatgagctgccgctgcgttatatgattaaacacggctatctgacgccgccagaa
cggctggatatgccagtcgtgcaatacgatttcagccgcttgcaggcacagagtaacgga
ctgttcagcgaagccgatctcaaccgcgagctgaaaaaacagcaacgcattacgccacac
atcatcagccaaatcatggagtttgctgcaacgcgcaaaggggtgatgattttcgccgcg
acggtcgaacacgcaaaagagattgtgggattactgcctgccgaagatgcagcactgatt
actggcgacacacccggctctgagcgcgatgtgttaattgatgattttaaagcccagcgt
tttcgctatctggtcaacgtcgcggtactgaccaccggatttgacgccccgcacgtcgat
cttatcgccattctgcgccctaccgaatcagtgagtctttaccaacaaattgtcgggcgc
ggtctgcgcctggcccccggcaagactgattgcttaattcttgattatgcgggtaaccct
cacgatctctacgcgccggaagttggtacaccgaaaggcaaaagtgacaacgttccggta
caggttttctgccctgcctgcggttttgccaacaccttttgggggaaaacgaccgccgac
gggacattgattgaacactttggtcgtcgctgtcagggatggtttgaagatgacgacgga
catcgcgaacagtgtgacttccgtttccgttttaaaaattgcccgcaatgtaacgcagaa
aatgatattgccgctcgccgctgccgcgaatgtgacacggtactggttgatccggatgat
atgttaaaagcggcgctacgactgaaagacgcgctggtattacgctgtagcggcatgtct
ttgcagcatggacacgacgagaaaggcgaatggttgaaaatcacctattacgatgaagac
ggcgcggatgtgagtgagcgtttccgtctgcaaacgcccgcccagcgtaccgccttcgag
cagctttttatccgcccgcatacgcgcacaccgggcatccctctgcgctggatcaccgcc
gccgatatcctcgcccagcaagcattactgcgacacccggattttgtcgtcgcccgcatg
aaaggtcagtactggcaagtgcgtgaaaaagtgttcgattacgaaggtcgttttcgtcgg
gcgcacgaattacgcggttaa
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