Escherichia coli O9 HS (commensal): EcHS_A2179
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Entry
EcHS_A2179 CDS
T00591
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ecx
Escherichia coli O9 HS (commensal)
Pathway
ecx00521
Streptomycin biosynthesis
ecx00523
Polyketide sugar unit biosynthesis
ecx00541
O-Antigen nucleotide sugar biosynthesis
ecx01100
Metabolic pathways
ecx01110
Biosynthesis of secondary metabolites
ecx01250
Biosynthesis of nucleotide sugars
Module
ecx_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EcHS_A2179 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EcHS_A2179 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EcHS_A2179 (rfbC)
Enzymes [BR:
ecx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EcHS_A2179 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABV06468
UniProt:
A0A7I6GZM2
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Position
complement(2158187..2158741)
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AA seq
184 aa
AA seq
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MNIIKTDIPEVLIFEPRVFGDARGFFFESFSSKVFNEAVGRQVDFVQDNHSQSQKGVLRG
LHYQLAPHAQGKLVRCVEGEVFDVAVDIRRSSPTFGKWVGAVLSAENKRQLWIPEGFAHG
FMALSDTVQFVYKATNYYAPQSERSIIWNDPEIGIDWPALSDCALSLSEKDLQAHTLATA
EVYK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaacattattaaaacagatattcctgaggtgctgatttttgaaccgcgcgtgtttggt
gatgcgcggggcttcttcttcgagagcttcagcagcaaggtgtttaatgaagcggtgggc
cgccaggtggattttgttcaggacaaccactcccagtcccagaaaggcgtactgcgcggg
ctgcactatcagctggctccgcacgcccagggcaaactggtccgctgtgtggaaggtgag
gtgtttgatgtggcggtggatatccgtcgttcatcgcccacctttggcaaatgggtgggc
gcggtactcagcgcagagaataaacgtcagctgtggatcccggaagggttcgcccacggg
tttatggcgctgagcgacacggtgcagtttgtctacaaggcgacgaactactacgcgccg
cagtcagaacggagcatcatctggaacgatccggagatcgggattgactggccggcgctg
agcgattgcgcgctctcgctgtcggagaaagatctgcaggcacatactcttgccactgca
gaagtatataaataa
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