Escherichia coli O152 H28 SE11 (commensal): ECSE_4016
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Entry
ECSE_4016 CDS
T00784
Name
(GenBank) putative fimbrial usher protein LpfC
KO
K07347
outer membrane usher protein
Organism
ecy
Escherichia coli O152:H28 SE11 (commensal)
Pathway
ecy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECSE_4016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecy02000
]
ECSE_4016
02044 Secretion system [BR:
ecy02044
]
ECSE_4016
02035 Bacterial motility proteins [BR:
ecy02035
]
ECSE_4016
Transporters [BR:
ecy02000
]
Other transporters
Pores ion channels [TC:
1
]
ECSE_4016
Secretion system [BR:
ecy02044
]
Chaperone-usher system
Type 1 pilus assembly protein
ECSE_4016
Bacterial motility proteins [BR:
ecy02035
]
Pilus system
Fimbrial proteins
ECSE_4016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
BAG79540
UniProt:
A0A979GIW8
LinkDB
All DBs
Position
complement(4161790..4164312)
Genome browser
AA seq
840 aa
AA seq
DB search
MMTTRIVVGLTAGTCLIFSQNLMAEVSVFNPALLEIDHQSGVDIRQFNRANLMPPGVYSV
DIFINGKMFERQDVTFVQDNPDADLHACFIAIKKTLSSFGIKVDALKSFNDVDETVCLDP
APRIEGSSWQFDSDKLQLNISIPQIYMDAMAYDYISPTRWDEGINALTINYDFSGSHTLR
SDYGSQETDTSYLNLRNGLNIGPWRLRNYSTLNTSDGRAEYNSLSTWIQRDIAALRSQIM
IGDTWTASDIFDSTQIRGARLYTDNDMLPASQNGFAPVVRGIAKSNATVIIRQNGYVIYQ
SAVPQGAFEITDLNTASTGGDLDVTIKEEDGSEQRFTQPYASLAILKREGQTDVDVSVGE
LRDEDGFTPDVLQAQILHGFSHGITLYGGMQAAENYGSAALGVGKDLGALGAISFDVTHA
RANFSHDDTETGQSYRFLYSKRFDDTDTSLRLVGYRYSTEGYYTLNEWASRRNSPEDFWE
TGNRRSRVEGTLTQSLGRDYGNLYLTLSRQQYWHTDDVERLMQFGYSSSWKRLSWNVSWS
YSNTARQGTGNNHASDNTSEQIYMLSLSVPLSGWWGNSYATYSVSQNDNSGSSHQLGLSG
TALERNNLSWNLMQSYNSHDDEVGGNMSLTYDGSYGTVNGSYNYSQNSQRLNYGIRGGIL
AHSEGVTLSQELGETIALVKAPGAAGLEIDNMRGAATDWRGYTVKTQLNPYDENRVAISD
NYFSKSNIELDNTVVTMVPTRGAVVKAEFVTHVGYRVLFRVLNANGKPVPFGAIAAIQDA
SLADSGIVGDRGELYLSGLPEKGQVTLSWGENASTKCIFNYSLSTPESESGLIEQGVTCH
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgaccagaatagtggttggcctcacggcagggacgtgtctgattttctcgcaa
aacctgatggccgaggtcagtgtattcaatccggcgcttctggaaatcgaccatcaatcc
ggagtcgatattcgccagtttaatcgggcaaacctgatgcccccaggtgtttatagcgtt
gatatttttatcaacggtaaaatgtttgaacgtcaggatgtgacatttgttcaggataat
ccagatgctgatctgcacgcatgctttattgccattaaaaaaacactgtcctcctttggc
ataaaagttgatgcgctcaaatcgttcaatgatgtggatgagacggtttgcctcgatcct
gctccacgtattgaaggctcatcctggcagtttgacagtgataaattgcagctgaatata
tccattccccaaatctacatggacgcgatggcttatgattacatcagccccacgcgttgg
gatgaggggattaacgcgctcaccatcaactacgatttttctggttcacatacactacgt
tcagattatggttcacaagagacagataccagttatctcaatctgcgcaatggactgaat
attggaccgtggcggctacgtaattacagtactttaaacaccagcgatggccgtgcggaa
tacaactcccttagtacctggatacagcgcgatattgccgcgttaagaagccagattatg
attggtgatacgtggacggcgagcgatattttcgacagtacgcaaattcgcggcgcgcgt
ttgtatactgataacgatatgctacccgccagccagaatggctttgctcctgtggttcgt
gggattgcaaagtccaacgccaccgtcatcattcggcagaatggctacgtgatttatcag
tctgccgttccacaaggtgcttttgagatcaccgatctcaacaccgccagtacaggtggc
gatttggacgtaaccatcaaagaagaagacggtagcgaacaacgattcacccaaccttat
gcttcattggcgattcttaaacgtgaaggtcagacagatgttgatgtcagcgtgggtgaa
ttgcgcgatgaagacggatttacaccggacgtccttcaggcgcaaatacttcatggtttt
tcccacgggatcactttatatggaggtatgcaggctgctgaaaattatggttctgcagct
ctgggtgtcggtaaagatcttggcgctttgggcgcaatttctttcgatgtgacacatgct
cgtgcgaattttagccatgatgatacagaaacgggtcagtcatatcgctttctctattca
aaacgatttgacgacacagacactagcttgcgcctggttggctatcgttactccaccgag
ggctactataccctcaatgagtgggcatcgcggcgcaacagccctgaagacttttgggaa
acaggtaaccgacgtagtcgcgtggagggaacgctaacgcagtcgttggggagagattat
ggcaatttatacctgacattaagccggcaacaatactggcataccgatgatgtcgaacga
ttaatgcaatttggctacagcagtagctggaagcgtctctcgtggaacgtctcctggagt
tattccaatactgccagacaggggacggggaacaaccatgccagtgataacaccagtgag
cagatctacatgctctctttatctgttcctttatcgggctggtggggtaatagttacgcc
acctattctgtttcgcaaaacgataattccggtagctcacatcaactcggactcagcggt
acggcgctggaaagaaataacctttcatggaatttaatgcagtcctataacagtcatgat
gatgaggttggcggtaatatgtccctgacctatgatggctcttatggcacggtgaacggc
agctataactacagccaaaattcccagaggctgaattatggtatcagagggggaattctg
gcacacagcgaaggggtaacgttaagtcaggagttaggtgaaactattgctcttgttaaa
gcacctggggccgccgggttagaaatagataatatgcgcggtgctgcgacggactggcgc
ggctatacggtcaagacacagctaaacccttatgatgaaaatcgggtagcaatcagcgat
aactatttctcgaagtcgaatatagaacttgataataccgtcgttacgatggttcccacg
cgtggtgcagtggttaaagcggagtttgtgactcatgtgggttatcgcgttctcttcaga
gtgttaaatgcaaatggtaaaccggtaccttttggagccattgctgcgatacaagatgca
agtttggcagattcaggaattgtcggtgaccgtggcgaactttatctttctggtctacca
gaaaaaggacaggttacgttatcctggggagaaaacgcctcaacaaaatgcatcttcaat
tattcactttcgacaccagaaagtgagagcggattaattgaacagggtgtgacatgtcat
taa
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