Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_3348
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Entry
ECS88_3348 CDS
T00830
Symbol
yghJ
Name
(GenBank) inner membrane lipoprotein
KO
K10939
accessory colonization factor AcfD
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
TonB_N
Neisseria_TspB
Motif
Other DBs
NCBI-ProteinID:
CAR04580
UniProt:
B7MNA9
LinkDB
All DBs
Position
complement(3305869..3310449)
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AA seq
1526 aa
AA seq
DB search
MSLALLMNKKFKYKKSLLAAILSATLLAGCDGGGSGSSSDTPSVDSGSGTLPEVKPDPTP
TPEPTPEPTPDPEPTPDPTPDPEPTPEPEPEPVPTKTGYLTLGGSQRVTGATCNGESSDG
FTFTPGNTVSCVVGSTTIATFNTQSEAARSLRAVDKVSFSLEDAQELANSENKKTNAISL
VTSSDSCPADAEQLCLTFSSVVDRARFEKLYKQIDLATDNFSKLVNEEVENNAATDKAPS
THTSTVVPVTTEGTKPDLNASFVSANAEQFYQYQPTEIILSEGQLVDSLGNGVAGVDYYT
NSGRGVTDENGKFSFSWGETISFGIDTFELGSVRGNKSTIALTELGDEVRGANIDQLIHR
YSTTGQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLDEGDQNVVLPNEFIEQFKT
GQAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYQSVSKFHVFHD
STNFYGSTGNARGQAVVNISNSAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIV
QPENVTRDTATFNLPFISLGQVGEGKLMVIGNPHYNSILRCPNGYSWGGGVNSKGECTLS
GDSDDMKHFMQNVLRYLSNDIWQPNTKSIMTVGTNLENVYFKKAGQVLGNSAPFAFHEDF
TGITVKQLTSYGDLNPEEIPLLILNGFEYVTQWSGDPYAVPLRADTSKPKLTQQDVTDLI
AYLNKGGSVLIMENVMSNLKEESASSFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRR
ATGIWVYERYPAADGAQPPYTIDPNTGEVTWKYQQDNKPDDKPKLEVASWQEEVEGKQVT
RYAFIDEAEYTTEESLEAAKAKIFEKFPGLQECKDSTYHYEINCLERRPGTDVPVTGGMY
VPRYTQLNLDADTAKAMVQAADLGTNIQRLYQHELYFRTKGSKGERLNSVDLERLYQNMS
VWLWNDTKYRYEEGKEDELGFKTFTEFLNCYANDAYAGGTKCSADLKKSLVDNNMIYGDG
SSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGSVSAKGESVTENISLYS
NPTKWFAGNMQSTGLWAPAQQDVTIKSSASVPVTVTVALADDLTGREKHEVALNRPPRVT
KTYTLEANGEVTFKVPYGGLIYIKGDSKDDVSANFTFTGVVKAPFYKDGEWKNDLDSPAP
LGELESASFVYTTPKKNLEASNFTGGVAEFAKDLDTFASSMNDFYGRNDEDGKHRMFTYK
NLTGHKHRFTNDVQISIGDAHSGYPVMNSSFSTNSTTLPTTPLNDWLIWHEVGHNAAETP
LNVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLDESNGQAWARGGAGDRLLMY
AQLKEWAEENFDIKQWYPDGELPKFYSDRKGMKGWNLFQLMHRKARGDDVGNSTFGGKNY
CAESNGNAADTLMLCASWVAQADLSEFFKKWNPGASAYQLPGATEMSFQGGVSSSAYSTL
ASLKLPKPEKGPETINKVTEHKMSAE
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacttgcgttattaatgaataagaaatttaaatataagaaatcgcttttagcggct
attttaagcgcaaccctgttagccggttgtgatggtggtggttcaggatcgtcctccgat
acgccgtctgtagattctggatcagggactttgccggaagtgaaacccgatccaacacca
accccggagccgacacctgagccgacgccggacccagaacctacgccggatccaacacct
gatcctgagccgacaccagaaccggagccagaacctgttcctacgaaaacgggttatctg
accctgggcggaagccagcgggtaactggtgctacctgtaatggtgaatccagcgatggc
tttacctttacgccaggcaataccgtgagttgtgtggtgggcagtacgaccattgcaaca
ttcaacacccagtcagaagctgcgcgtagcctgcgtgcggttgacaaagtgtcgtttagc
ctggaggacgcgcaggagctggcgaattctgaaaataagaaaaccaacgccatctctctg
gtgacgtccagcgacagttgccccgcagatgcagaacagctttgtcttactttctcgtca
gtggttgatcgcgcgcgatttgaaaaactgtataagcaaattgatctggcaacagacaat
ttcagcaagctggtcaatgaagaggtggaaaacaatgctgcgactgataaagcgccgtcc
acccatacctcaacggtagtgccagtcacgacagagggaacaaaaccggatctgaacgcg
tccttcgtgtcggctaacgcggaacagttttatcagtatcaacccactgaaatcattctt
tccgaaggccaactggtggatagcctggggaacggtgttgctggcgttgactactacacc
aattcaggccgtggcgtaactgacgaaaacggtaaattttcctttagctggggcgaaacc
atctcctttggtatcgatacctttgaactgggctcagtacgtggcaataagtcgaccatt
gcgctgactgaattgggtgatgaagttcgcggggcaaatatcgatcagctcattcatcgt
tattcgacgactggtcaaaataatactcgtgttgttccggacgatgtacgcaaggtcttt
gccgaatatcccaacgtgatcaacgagataatcaatctttcgttatccaacggtgcgacg
ctggatgaaggcgatcaaaacgttgtgctgcctaacgaatttatcgagcagtttaagacg
ggtcaggccaaagagatcgataccgcgatttgtgcgaaaaccgacggttgtaacgaggct
cgctggttctcgctgacaacgcgcaatgttaatgacggccagattcagggcgttattaac
aagctgtggggcgtggatacgaactatcagtctgtcagcaagttccacgtcttccatgac
tctaccaacttctatggcagtaccggtaacgcgcgcggtcaggcggtggtaaatatctcc
aactcggcattcccgattctgatggcgcgtaatgataaaaactactggctggcgtttggc
gaaaaacgcgcctgggataaaaatgagctggcgtacattacggaagcgccttccattgtg
cagccagagaatgttacgcgcgatactgcgactttcaacctgccgtttatttcgctgggg
caagtcggtgaaggcaaactgatggttatcggtaacccgcactacaacagcatcctgcgt
tgcccgaacggttacagttggggcggtggtgttaatagtaaaggtgagtgtacgctcagc
ggtgattctgatgacatgaagcactttatgcagaacgtactgcgctacttgtcaaatgac
atctggcagccaaataccaagagcatcatgactgtcggcaccaacctggagaacgtttat
ttcaaaaaagcgggccaggtattgggaaatagtgcaccatttgctttccatgaggatttc
actggtatcacggttaaacagttgaccagctatggcgatctgaatccggaagagattccg
ttgctgatcctcaacggctttgaatatgtgactcagtggtctggcgatccctatgctgtg
cctctgcgtgcagataccagcaaaccgaagctgactcagcaggatgtgaccgatctgatc
gcttatctgaacaaaggtggctcggtgctgatcatggaaaacgtgatgagcaatcttaag
gaagagagcgcgtccagttttgtgcgtctgctggatgccgcgggtctgtcaatggctctg
aacaaatcggtggtgaacaacgatccgcaagggtatccggatcgcgttcgtcagcgtcgc
gcgactggcatttgggtttatgaacgttatcctgctgcagacggcgcgcaaccgccgtac
accatcgacccaaatacaggggaagtgacctggaaataccagcaagacaacaagcctgat
gacaagccgaaactggaagttgcgagctggcaggaggaagttgagggcaaacaggtaacg
cgttatgcctttattgatgaagcggaatacacaacagaagaatctctggaagcggcaaag
gcaaaaatctttgagaagtttcctgggttacaggagtgtaaggactcgacttaccattac
gagattaactgtttggagcgccgcccaggcacggatgttccggtaacaggtggcatgtat
gttccgcgctatacgcaactgaatcttgacgccgacaccgcgaaagcgatggtgcaggcg
gcggatttaggcaccaacattcagcgcctgtatcagcatgagctttatttccgtaccaaa
ggcagtaaaggtgagcgtctgaacagtgttgatctggaacgtctgtaccagaacatgtcg
gtctggctgtggaacgatacgaaatatcgttacgaagagggcaaggaagatgagctgggc
tttaaaacgttcaccgagttcctgaactgctacgccaatgatgcctatgcaggcggcacc
aagtgctccgcagatctgaaaaaatcgctggtcgataacaacatgatctacggtgacggt
agcagcaaagcgggcatgatgaacccaagctatccgctcaactatatggaaaaaccgctg
acgcgtctgatgctgggccgttcctggtgggatctgaacattaaggttgatgtggagaag
tacccaggatccgtatcggcaaagggtgagagcgttacggaaaacatcagcctgtactcg
aatccgaccaaatggtttgcgggtaacatgcagtcaaccggcctgtgggcaccggcccag
caggacgtcaccattaagtcttcggcgtcagtcccagtgactgttaccgtggcgctggct
gacgacctgactggacgtgagaagcatgaagttgcgctgaaccgtccgccaagagtgact
aaaacgtatactctggaggctaacggtgaagtgaccttcaaggtgccttatggtggtctg
atttatatcaagggcgacagtaaggatgatgtttctgctaacttcacctttaccggtgta
gtaaaagcgccgttctataaagacggcgaatggaaaaacgatctggactcaccggcgccg
ctgggcgagctggagtctgcgtcgttcgtctataccacgccgaagaagaaccttgaggcc
agcaatttcactggtggtgtagcagaattcgctaaagatctggatacctttgccagctcg
atgaatgacttctacggtcgtaatgatgaagacggtaagcaccggatgtttacctataaa
aacttgacggggcacaagcatcgtttcaccaacgatgtgcagatctccatcggtgatgcg
cactcgggttatccggtaatgaacagcagcttctcgacgaacagcaccacgctgccgacg
acgccgctgaacgactggctgatttggcacgaagtcggtcataacgctgcagaaacaccg
ctgaacgtaccgggtgcaactgaagtggcgaacaacgtgctggcgctgtacatgcaggat
cgctatctcggtaagatgaaccgtgtcgctgacgacattaccgtcgcgccggaatatctg
gacgagagcaacggtcaggcctgggcgcgcggcggtgcgggtgaccgtctgctgatgtac
gcacagttgaaggagtgggcagaggaaaactttgatatcaaacagtggtatccagatggt
gagctgcctaagttctacagcgatcgtaaagggatgaagggctggaacctgttccagttg
atgcaccgtaaagcgcgcggcgatgatgttggtaacagcacctttggtggcaagaattac
tgtgctgaatccaatggtaacgctgccgacacgctgatgctgtgtgcatcctgggtcgct
caggcggatctttcggaattctttaagaaatggaatccgggtgcaagtgcttaccagttg
ccgggagcaacggagatgagtttccagggcggtgtgagctcttcggcttacagcacgctg
gcgtcactcaagctgccgaaaccggaaaaagggccggaaaccattaacaaggttaccgag
cataagatgtctgccgagtaa
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integrated database retrieval system
