Edaphobacter sp. 12200R-103: GWR55_12775
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Entry
GWR55_12775 CDS
T06408
Name
(GenBank) ATP-dependent DNA ligase
Organism
eda
Edaphobacter sp. 12200R-103
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
PMI_typeI_hel
Motif
Other DBs
NCBI-ProteinID:
QHS52505
UniProt:
A0A6B9YTB2
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Position
3080888..3082798
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AA seq
636 aa
AA seq
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MSLFRELAELAEKLAGEPGRLRKRGAIAEAIRRVHEAAPEREDAGLFALYLAGTPFAEAD
PRKLNAGGALLSRALLEVSGATQVELTAAYKRHGDLGAAGFDLLQARHSAGSGLTLAEVA
DTFAAMAVARTTAVRARLVEELLRRAAPLEAKYLLKLMLGDMRIGVKQSLVEEAIAAASS
SSAAEVRHAVMLEADLSLAVERAFAGTLKEARMRLFHPLGFMLASPVDSPEEAVERFAEA
SIGEGRIRGRKADPSTALRSIRDDGSGEQEEPPHIAAFLEDKYDGMRAQVHCGDPSHPGR
VAIYSRNKEDVTESYPDLEEAFAKVTKADVGPLIFDGEILGWDLKESRALPFAVLGQRIG
RKRVSNAWREQVPVIFMAFDLIYAEDELLLGLPLRERRNRLEAVVEKLVQVAVSPLTIDE
RRKAPQGLIFEEPEGERVERLMLAPSRTVESAEDIDRAYADARARANEGVMLKAADSMYQ
PGRRGLAWLKLKRELATLDVVVTGAEFGHGKRAGILSDYTFAVRGPNDAKDGELLNVGKA
YSGLTDAEIAEMSAWMMEHTLEDHGFFRTVEPLRVLEVAFNNVMRSDRHASGFALRFPRI
VRIRDDKPVDEIDTLERVEEVYQSQVDKPVEPKSEV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctattccgggagctggcggaacttgcagagaaactggcgggtgagccaggccgt
ttgagaaaacgcggtgcgatcgcggaggcaatccgcagagtgcatgaggctgctcccgaa
agagaggatgcgggcctcttcgcgctgtatcttgcaggcactccattcgctgaggccgat
ccgcgcaagctgaacgccgggggagccctgctgtccagggcgcttctggaggtgagtgga
gctacccaggttgagctgacggcggcctataagcgccacggcgacctgggagctgccggg
ttcgatctgctccaggcgaggcacagcgcgggcagcggcctgacactggccgaggttgcc
gatacctttgccgcgatggcagtagcgcgcacgacggcggttcgcgcccgccttgtggag
gagcttctgcgccgtgctgctcccctcgaagccaagtacctgctgaagctgatgctcggg
gacatgcgcatcggcgtgaagcagagcctggtggaggaggcgatcgcggcggcatcgtcc
agctccgctgccgaggtgcgacacgccgtgatgctggaagccgatctgtcgctcgcggtg
gagcgcgcctttgcaggaaccctgaaagaggcccgcatgcgcctgtttcatccgctggga
ttcatgctggcctcgccggtggactcgcctgaagaggcagtggagcggtttgcggaggct
tcgattggggaaggaagaattcgtggtcgaaaagcagatccctccactgcgctgcgctcc
attcgggatgacggttctggtgaacaggaagagccgcctcacatcgctgcgtttcttgag
gacaaatacgacggcatgcgagcgcaggtgcactgcggcgatccgtcgcatccaggcagg
gtggcgatctactcgcgcaacaaggaggatgtgaccgagagctatcccgatcttgaagaa
gccttcgcgaaagtgactaaggcggatgtcgggccgctgatcttcgatggcgagattctg
ggctgggacctgaaggagagccgagcgcttccgttcgccgtactgggtcagcgtatcgga
cgcaagcgtgtctcgaatgcgtggcgggaacaggtgccggtgatcttcatggccttcgat
ctgatctatgccgaggacgagctgctgctggggcttccgttgcgcgagcgtcgcaaccgg
cttgaggccgtggtcgagaagctggtgcaggtagcagtctctcctctgaccatcgacgag
cgcagaaaagcgccgcaggggctgatcttcgaagagcccgaaggcgagcgggtggagcgc
ctgatgctcgcaccctcgcgcaccgtcgagtctgccgaagacatcgatcgcgcctacgcc
gacgcacgcgcgcgtgcaaatgaaggcgtgatgctgaaggctgctgactcgatgtaccag
ccgggaaggcgcggcctggcatggctgaagctgaagcgtgagctggcgacgctggatgtc
gttgtgacgggagcggagttcggtcatggcaaacgcgcgggaatcctgagcgactacacc
ttcgccgtacgtggaccgaacgatgcgaaggacggcgagctgctgaatgtaggcaaggcc
tactccggcctgacggatgccgagatcgcagagatgagcgcgtggatgatggagcacacg
ctcgaggaccacggcttctttcgcacggtggagccgctgcgtgtgctcgaagtggcattc
aacaacgtcatgcgcagcgaccggcacgccagcggattcgccctgcgctttccacgcatc
gtacgcatccgcgatgacaagcccgtcgatgagatcgacacgctggagcgggtggaagag
gtgtatcaatcgcaggtggataaaccagtagaaccgaagagtgaggtatag
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