Escherichia coli DH1: EcDH1_2160
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Entry
EcDH1_2160 CDS
T01996
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
edh
Escherichia coli DH1
Pathway
edh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
edh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EcDH1_2160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
edh02000
]
EcDH1_2160
Transporters [BR:
edh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EcDH1_2160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
OpuAC
Motif
Other DBs
NCBI-ProteinID:
ACX39812
LinkDB
All DBs
Position
2315997..2317547
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AA seq
516 aa
AA seq
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MKRSISFRPTLLALVLATNFPVAHAAVPKDMLVIGKAADPQTLDPAVTIDNNDWTVTYPS
YQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDNAKFADGTPVTAEAVKLSF
ERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFLYTLANDGASIINPAVLKEHA
ADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYPGNKPNFKRVSVKIIGESASRRL
QLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLRVTYLYLNNSKAPLNQADLRRAISW
STDYQGMVNGILSGNGKQMRGPIPEGMWGYDATAMQYNHDETKAKAEWDKVTSKPTSLTF
LYSDNDPNWEPIALATQSSLNKLGIIVKLEKLANATMRDRVGKGDYDIAIGNWSPDFADP
YMFMNYWFESDKKGLPGNRSFYENSEVDKLLRNALATTDQTQRTRDYQQAQKIVIDDAAY
VYLFQKNYQLAMNKEVKGFVFNPMLEQVFNINTMSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatcgatatcgtttcgtcccacattgctcgcgctcgtccttgccacaaatttc
ccggttgcgcacgccgccgtaccaaaagatatgctggtgattggtaaggccgccgatcca
caaaccctcgacccggcggtaacaatagataataacgactggacagtgacctacccgtct
tatcagcggctggttcagtacaaaacggacggtgataaaggctcaaccgacgttgaaggc
gatctggcaagtagctggaaagcgtctgacgatcaaaaagagtggacgttcaccctgaaa
gataatgctaaatttgccgatggcacacctgtcactgccgaagcagtaaaactttctttt
gagcggctactaaaaatcggccaggggccagcagaagcatttcccaaagatttaaagatt
gatgctcccgacgaacatacggtgaagtttacccttagccaaccattcgcaccgttcctc
tacacgctggcgaatgacggtgcatccattatcaatccggcggtcttaaaggaacatgca
gcggatgatgctcgcggcttcctcgcgcaaaataccgccggttccggaccatttatgctg
aaaagctggcaaaaaggtcagcaattagttctggtgccaaatccgcattacccaggcaat
aaaccgaacttcaaacgggtatcggtaaaaattattggtgaaagtgcctcccgtcgcctg
cagctctcccgtggcgacattgacattgccgatgcgctgccggtggatcaactcaacgcc
ctgaagcaggaaaataaagtcaatgtggcagagtatccgtcactgcgcgttacctatctg
tatctgaataacagcaaagcgcctcttaatcaggcggatctgcgtcgggccatttcctgg
tctaccgattatcagggcatggttaacggcattctgagtggtaacggaaaacagatgcgc
ggcccgattccggaaggcatgtggggctacgatgcgacggcaatgcaatacaaccatgac
gaaacgaaagccaaagccgaatgggataaagtgacgagcaaacccaccagcctgacgttt
ctctactccgataacgatccgaactgggagcctattgctctggcgacacaatccagtctc
aacaagctgggcatcattgtgaagctggaaaagctggcgaacgccaccatgcgcgacaga
gtgggtaaaggtgattacgacattgcgattggcaactggagtccggattttgccgacccg
tatatgtttatgaattactggtttgagtcagacaaaaaaggtctgccgggtaaccgctcg
ttctatgaaaacagtgaggtcgataagttactgcgcaatgcgcttgcgaccaccgaccag
acgcagcgtacccgggactaccagcaggcacagaaaatcgtcattgatgacgctgcttat
gtgtacctgttccagaaaaactaccaactggcgatgaacaaagaggtgaaaggctttgtg
ttcaatcccatgctggaacaggtcttcaatatcaataccatgagtaaataa
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