KEGG   Entamoeba dispar: EDI_053700
Entry
EDI_053700        CDS       T01083                                 
Name
(RefSeq) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
edi  Entamoeba dispar
Pathway
edi03030  DNA replication
edi03410  Base excision repair
edi03420  Nucleotide excision repair
edi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:edi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EDI_053700
   03410 Base excision repair
    EDI_053700
   03420 Nucleotide excision repair
    EDI_053700
   03430 Mismatch repair
    EDI_053700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:edi03032]
    EDI_053700
   03400 DNA repair and recombination proteins [BR:edi03400]
    EDI_053700
Enzymes [BR:edi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     EDI_053700
    6.5.1.6  DNA ligase (ATP or NAD+)
     EDI_053700
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     EDI_053700
DNA replication proteins [BR:edi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    EDI_053700
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     EDI_053700
DNA repair and recombination proteins [BR:edi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     EDI_053700
   NER (nucleotide excision repair)
    Other NER factors
     EDI_053700
   MMR (mismatch excision repair)
    Other MMR factors
     EDI_053700
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme DNA_ligase_OB_2 T3SS_HrpK1
Other DBs
NCBI-GeneID: 5879713
NCBI-ProteinID: XP_001734783
UniProt: B0E8U9
LinkDB
AA seq 686 aa
MSKRQSSLSRFFKPAKRTTTGDQKSGENKVDEKGDENKKEQESTEEKNQNLQIKEDGNSF
VEQKVKTLPFKGLADCFDALENETGKLKKREIYANYLKTVIAICPNDLTDVLNLTTGQIA
PTWEGKELGIGDAILKDVVKGVTGLKLSQLNDKIRELGDIGIVAQNSKKNQKLLVQPKPL
TIQGVVLRMKEILEADNSDVKKNKITALLVAAIGNEIRFILRILKGVFRIGFTDRSLPPA
IAQAVCSIRKENNRIEELTELITNAVARVPSFQYLSEHITANDPFEEFAKTNAVQLFIPF
RPMLAKPKKSVTDITSRFKFPFTAEYKYDGERGQIHFNKNKVMVFTRNLENYTEKYPDVI
EAVKEAVNSNVQSFIIDCEIVAFNRETNEFQEFQILGRRAKKGVSVHSIAINVCVNVFDI
VYLNGKDLMDKPLKERRDILHSTFHEVSQRFLFARFKNIENEEDILPFFEEAINHRTEGL
MCKTLVYDAEYIPDKRTDTWYKLKKDYLNGLADTVDLVPVGAWMGEGKRAGVYGAFLLAC
RDEDSGDFETVTKVGTGFSDEALQKLYEHLKTLECKEKKNVKHGDNLPDVWFEPKDVWEI
KGADLSLSLQYRAGIKLVNTEGRGVCLRFPRYIRTRDDKEVNDITTNKQIYDLYKEQPSV
RETKDGQMKIINNENEEESQESEEKE
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgtcaaaaagacaatcctccctctcacggttctttaaacctgccaaaagaactacaacc
ggagaccaaaagagtggagaaaataaagttgatgaaaaaggagatgaaaacaaaaaagaa
caagagtccactgaagaaaaaaatcaaaatttacagataaaagaagatggtaattctttt
gttgaacagaaagtaaaaactttaccgttcaaaggtttggctgattgttttgatgcttta
gaaaatgaaactggaaagttaaagaaaagagagatttatgccaattatcttaaaacagta
atagccatatgtcctaacgatttgactgatgtcttaaatttaactactgggcaaattgct
cccacctgggaaggaaaagaattaggaattggagacgctattttaaaagatgttgtaaaa
ggtgtcactggactaaaactgagtcagttaaatgataaaataagagaattaggtgatatt
ggaattgtagctcaaaactcaaagaagaatcaaaagttattagttcaaccaaagccactt
acaattcaaggagttgtacttcgtatgaaagagattcttgaagctgataatagcgatgtt
aaaaagaataaaattactgcattattagttgcagctataggaaatgaaattcgttttatt
ttgagaatacttaagggagtttttagaattggttttactgatagatctttacctcctgca
atagcacaagcagtttgttcaataagaaaagaaaataatagaatagaagaattaactgaa
ttaattacaaacgctgttgctcgtgttccatcatttcagtatttatctgaacatataaca
gcaaatgatccctttgaagaatttgctaaaacaaatgcagttcaattatttattccattt
agaccaatgttagctaaacctaagaaaagtgtaactgatattacttctagattcaaattt
ccatttacggctgaatataagtatgatggtgaacgtggtcaaattcattttaataaaaat
aaagttatggtttttacaagaaaccttgaaaattatactgaaaaatatcctgatgttatt
gaggcagtaaaagaagcagttaattcaaatgttcaatcatttattatagattgtgagatt
gttgcttttaatagagaaacaaatgaattccaagaatttcaaattcttggaagaagagca
aaaaaaggagtgtcagttcattctattgccattaatgtgtgtgtaaatgtttttgacatt
gtttatttaaatggcaaagatttaatggataaaccattaaaagaacgtcgtgatatttta
cattcaacatttcatgaagtttcacagagattcttgtttgcaagatttaagaatattgaa
aatgaggaagacattttaccattttttgaagaggccataaatcatagaacagaaggattg
atgtgtaaaactcttgtctatgatgcagaatatattcctgacaaaaggactgatacatgg
tataaattaaaaaaagattacttaaatggattagctgatactgttgatcttgttccagtt
ggggcttggatgggagaaggaaaacgagctggagtatatggggcattcttattggcatgt
agagatgaagacagtggagattttgagacagttacaaaagttgggactgggtttagtgat
gaagctttacaaaagttgtatgaacatttgaaaactctagaatgtaaagaaaaaaagaat
gtaaaacatggagataatcttcctgatgtctggtttgaaccaaaagatgtatgggaaatt
aaaggagctgatttatcattatcactgcaatatagggctggtataaaattggttaataca
gaaggaagaggagtttgtctaagatttccaagatatatcagaactagagatgataaggaa
gtaaatgatatcacaacaaataaacaaatttatgatttgtataaagaacaaccatcagtc
agagagacaaaagatgggcaaatgaaaattataaataacgaaaatgaagaagaatcacaa
gagtctgaagaaaaggagtga

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