Entamoeba dispar: EDI_202520
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Entry
EDI_202520 CDS
T01083
Name
(RefSeq) TFIIH basal transcription factor complex p52 subunit
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
edi
Entamoeba dispar
Pathway
edi03022
Basal transcription factors
edi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
edi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EDI_202520
09124 Replication and repair
03420 Nucleotide excision repair
EDI_202520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
edi03021
]
EDI_202520
03400 DNA repair and recombination proteins [BR:
edi03400
]
EDI_202520
Transcription machinery [BR:
edi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EDI_202520
DNA repair and recombination proteins [BR:
edi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EDI_202520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
5886472
NCBI-ProteinID:
XP_001741280
UniProt:
B0ET79
LinkDB
All DBs
AA seq
489 aa
AA seq
DB search
MENNIIEKDIIKYFQVLPEIAMKSAYKSKWTCSEIFRLLPGMCQSLLLRIIFLKERITIH
ELYNQFKIPNETMDEVINTIHSIHIIDKEEENGILYIKLNNDFQNNFKMNLIGSMEPAYK
IKEVNEKVSQIIKEKCLKENCIKTFEYFMNKLLQFNSQPNISNNPLRIFKDLELVKEETR
QITRKGYQFLFQETKTQLWVIMLSIIGLIQRRISPFINDVFEMTYLKENIIYNCDRFKKV
YGPDPLQLFNDLGIIVYYKEQNVMAITPLMSLLRSNANIPSDLVKKPKTITEINYSVYIY
TESQFQVDLYRLFIRKNFQLANLWVGKLNHQSVTEAFAKGITSEMLINFLQPNLPRTIQK
QIDLWKKEINRFKEEHVVRYKFYDDAIGRQLFIIVKNESDRLKATILEKEDIRLIFVKYQ
YGETIRSFMKKKERELLLKQPHPSSTSVPLSLSTDNDSKILSKNNTHSGIKRSVPEGVKP
KPSKKYIVD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataatataatagaaaaggacattattaaatattttcaagttttaccagaaata
gccatgaaatcagcatataaatcgaaatggacatgttcagaaatatttcggttattacct
gggatgtgtcaaagtttgttattaagaattatttttctaaaggaaagaatcactatacat
gaattgtataatcaatttaaaataccaaatgaaacaatggacgaagtgattaatacaatc
catagcattcacattattgataaagaagaagaaaatggaattttgtatattaaactaaat
aatgactttcagaataattttaaaatgaatcttataggatcaatggaaccagcatataaa
attaaagaagttaatgaaaaagtatcacaaataattaaagagaaatgtttaaaagaaaat
tgtattaaaacatttgaatattttatgaataaattacttcaatttaatagtcaaccaaat
atttcaaataatccattaagaatatttaaagatttggaattagttaaagaagaaactaga
caaataactcgaaaaggataccaatttttatttcaagaaacaaaaacacaactttgggtt
attatgcttagtattattggtcttattcaaagaagaatatcaccatttattaatgatgtt
tttgaaatgacatatttaaaagaaaacattatttataattgtgatcgttttaaaaaagta
tatggaccagatccacttcaattatttaacgaccttggtattattgtatattataaagaa
caaaatgttatggcaattacaccgttaatgtctctacttcgatcaaatgctaatattcca
agtgaccttgtaaaaaaacctaaaacaataactgaaattaattattctgtttatatttat
acagagagtcaatttcaagttgatttatatagattatttattagaaagaatttccaatta
gctaatttatgggttggaaaacttaatcatcaatcagtaacagaagcatttgcaaaaggt
attactagtgaaatgttaattaatttcttacaaccaaatttacctcgaaccattcaaaaa
caaattgatttatggaaaaaagaaataaatcgatttaaagaagaacatgtagttcgttat
aaattttatgatgatgcaattggaagacaattatttattatagttaaaaatgaaagtgat
agattaaaagcaacgatattagaaaaagaagatattagattaatatttgtaaaatatcag
tatggagaaactattaggtcatttatgaaaaagaaagaaagagaacttttattaaaacaa
ccacatccttcttctacttctgttcctctttcattatcaactgataatgattctaaaata
ctttcaaaaaataatactcattcaggtattaaaagaagtgttcctgaaggagtaaaaccc
aaaccatcaaagaaatacattgttgattga
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