Escherichia coli DH1: ECDH1ME8569_3921
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Entry
ECDH1ME8569_3921 CDS
T02102
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator soxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
edj
Escherichia coli DH1
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
edj03000
]
ECDH1ME8569_3921 (soxR)
Transcription factors [BR:
edj03000
]
Prokaryotic type
Helix-turn-helix
MerR family
ECDH1ME8569_3921 (soxR)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR
MerR_1
HTH_17
HTH_3
TPP_enzyme_M
DUF2670
NinG
Motif
Other DBs
NCBI-ProteinID:
BAJ45777
LinkDB
All DBs
Position
4256574..4257038
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AA seq
154 aa
AA seq
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MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAII
KIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCI
GCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaattaccccgcattaaagcgctgctaacccccggcgaagtggcgaaacgc
agcggtgtggcggtatcggcgctgcatttctatgaaagtaaagggttgattaccagtatc
cgtaacagcggcaatcagcggcgatataaacgtgatgtgttgcgatatgttgcaattatc
aaaattgctcagcgtattggcattccgctggcgaccattggtgaagcgtttggcgtgttg
cccgaagggcatacgttaagtgcgaaagagtggaaacagctttcgtcccaatggcgagaa
gagttggatcggcgcattcataccttagtggcgctgcgtgacgaactggacggatgtatt
ggttgtggctgcctttcgcgcagtgattgcccgttgcgtaacccgggcgaccgcttagga
gaagaaggtaccggcgcacgcttgctggaagatgaacaaaactaa
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