Edwardsiella sp. LADL05-105: AAZ33_12100
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Entry
AAZ33_12100 CDS
T04005
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
edl
Edwardsiella sp. LADL05-105
Brite
KEGG Orthology (KO) [BR:
edl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
edl03400
]
AAZ33_12100
DNA repair and recombination proteins [BR:
edl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AAZ33_12100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zinc_ribbon_2
SLFN-g3_helicase
AAA_22
UPF0547
AAA_16
AAA
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
UBU94621
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All DBs
Position
2724362..2726122
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AA seq
586 aa
AA seq
DB search
MAFTLRPYQREAVDATLAHFRRHREPALIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYQAWGLEADIYAAGLKQKGSQAKVVFGSVQSVARNLSDFDAAFSLLIVDECH
RIGDSEEGQYQQILQHLRGHNPQLRLLGLTATPYRLGKGWIYRYHYHGMVRGDEACLFQD
CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSRLQPSEAGLFSAEDLNRELRDQQRITPH
IVSQIEEYAATRRGVMIFAATVEHAQEVLGLLPAGSAALISAQTPHDDRDAIIRDFKAQR
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLCDGKQDCLILDYAGNP
HDLYTPEVGSRKPHGDSQPVQVFCPACGFANTFWGKCDEQGRIVEHYGRRCQGYFEDDEG
QREQCDYRFRFKNCPQCNAENDIAARRCHQCAALLVDADDMLKAALRLKDALVLRCGGMQ
LRDGEDAKGEWLQITYYDEDGADVSERFRLTTPAQRTAFAQLFLRPHQRAPGCELIWQRA
ADIVAQQEALRAPDFVVARRRGQFWQVRQKVFDYQGRFRKANQLRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcctttaccctgcggccataccagcgtgaggccgtcgatgccacgctggcccacttc
cggcgccaccgggagccggcgttgatcgtgctgccgaccggcgccgggaaaagcctggtg
atcgccgaactggcccgcctggcgcgcggacgagtcctggtactggcccacgttaaagag
ctagtggcccaaaaccatgccaaatatcaggcctgggggctcgaggccgacatttatgcc
gccgggctgaagcaaaagggcagccaggccaaagtggtctttggcagcgtccagtcggtc
gcacgcaatctgtccgacttcgatgccgccttctccctgctgatcgtcgatgagtgtcac
cgcatcggcgacagcgaggagggacagtaccagcagatactgcagcacctgcgcggccat
aacccgcagctgcggctgctcgggctcaccgcgaccccctaccgactcggcaagggctgg
atctatcgctaccactatcacggcatggtacgcggcgacgaggcgtgtctatttcaggac
tgcatctacgagctgccgctgcgctatatgatccgccatggttttctggtgccgccggag
cggctggacatgccggtggtacagtacgatttcagccgtctacagccgtcggaggccggg
ctcttcagtgccgaggatctcaatcgagagctgcgcgatcagcagcgcattacgccgcac
atcgtcagccagatcgaggagtatgcggccacccggcgcggcgtgatgatcttcgccgcc
accgtcgagcacgcccaggaggtgctgggcctgctgccagcgggcagcgcggcgctgatc
agcgcgcagacgccccatgacgatcgcgacgcgatcattcgcgatttcaaggcgcagcgg
ctgcgctacctggtcaatgtggcggtgctcaccaccggctttgacgcgccgcacgtggat
ctgatcgctatcctgcgaccgacggagtccgtcagcctataccagcagatcgtcgggcgc
ggcctgcgcctgtgcgacggcaagcaagactgtctgatcctcgattacgccggtaaccca
cacgatctctatacacccgaagtcggcagccgcaagccccacggcgacagtcagccggtg
caggtgttctgccccgcctgtggcttcgccaataccttctggggcaagtgtgacgagcag
ggccgtatcgtcgagcactacgggcggcgctgccagggctatttcgaggacgacgaagga
cagcgcgagcagtgcgactaccgcttccgctttaaaaactgcccgcagtgcaatgcagaa
aacgatatcgccgcccgccgctgtcatcagtgcgccgcgctgctggtcgacgctgacgat
atgctgaaggcggcgctgaggctgaaagatgcgctggtgctacgctgcggcggcatgcag
ctgcgcgacggggaggatgccaagggcgagtggctgcagatcacctactacgacgaggac
ggcgccgacgtcagcgagcgcttccgcctgaccaccccggcccagcgcaccgcctttgcc
cagctctttctccgtccgcaccagcgggcgccgggctgtgagctgatctggcagcgggct
gccgatatcgtggcgcagcaggaggccctgcgcgcgcccgacttcgtggtggcgcgccgc
cggggccaattctggcaggtgcggcaaaaagtatttgactatcaggggcgttttcgcaag
gcgaaccaactgcgcggctaa
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