Edwardsiella sp. EA181011: QY76_16565
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Entry
QY76_16565 CDS
T03991
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
edw
Edwardsiella sp. EA181011
Pathway
edw03030
DNA replication
edw03430
Mismatch repair
edw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
edw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QY76_16565 (dnaE)
03430 Mismatch repair
QY76_16565 (dnaE)
03440 Homologous recombination
QY76_16565 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
edw03032
]
QY76_16565 (dnaE)
03400 DNA repair and recombination proteins [BR:
edw03400
]
QY76_16565 (dnaE)
Enzymes [BR:
edw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QY76_16565 (dnaE)
DNA replication proteins [BR:
edw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QY76_16565 (dnaE)
DNA repair and recombination proteins [BR:
edw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QY76_16565 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKM48697
LinkDB
All DBs
Position
complement(3739469..3742957)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAEPRFIHLHVHSDYSMIDGLAKTSPLVKKVAALGMPAFAITDHTNLCGLVKFYGSAHGA
GIKPLVGADVLVRSETMGDELSALTLLACDNEGYQNLTQLISHAYQRGYGAEGPTIDRDW
LIAYRAGLILLSGARHGDVGKLLLRGNQTLVGECVDFYQRHFPDSYFLELVRTGRPDEES
YLHLAVELAQQRDLPLVATNDVRFLEASDFDAHEIRVAIHDGYTLDDPKRPRNYSAQQYM
RSEEEMCELFADLPEALQNSVEIAKRCNVTIRLGQYFLPQFPTGEMSTEDFLVKMAHEGL
EERLTFLFPDEADRARLRRPYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYSLKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINARRARQGLEPVDIAAIPLDDQKSFDIL
QRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDREWQHESLKPVLEPTYGVILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEM
AKQRSVFEEGARNNGVNGELAMHIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGQYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNSGEQGYFKDLFDLCARTDTKKLNRRMMEKLIMSGAFDRLGPHRAAL
MSSLSDALKAAEQHARAEAIGQADMFGVLAEEPEQVEQSYGSVPPWPAQMVLDGERETLG
LYLTGHPITQYLKEIERYAGGGRLKDMHPTDRGKMTTAVGLVLGARVMTTKRGNRIGMCT
LDDRSGRLEVMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMIARELMDISEARE
KYARGLAISLTDRQIDDQLLNRLREALEPHRSGTIPVHLYYQRADARARVRFGAAWRVTP
TDRLLLDLRTLVGCEQVELEFD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccacgttttatacatctgcatgtgcacagtgactactcgatgatcgacggg
ctggcgaagaccagtcccctggtcaagaaggtcgccgcgctggggatgcccgccttcgcg
atcaccgaccataccaacctgtgcgggctggtcaagttttatggcagcgcgcacggcgcc
gggatcaagccgctggtcggggccgatgtcctggtccgcagcgagacgatgggcgatgag
ctgtcggcgctgactcttctggcctgtgataacgagggctaccagaatctgacccagctt
atctcacacgcctaccagcgcggctatggcgcagaggggccgacgatcgatcgcgattgg
ctgatcgcgtaccgcgccgggctgattttgctctccggcgcccgccacggcgacgtgggt
aagctgctgctgcgcggtaatcagacgctggtcggtgagtgcgttgacttctaccaacgg
cactttcctgatagctactttttagagttggtgcgcaccggacgccccgatgaggagagc
tatctgcacctggcggtggagctggcgcagcagcgtgatttgccgctggtggcgaccaac
gacgtccgcttcttggaggcctcggactttgacgcccatgagatccgcgtcgcgatccac
gacggctacaccttagacgatcccaagcgcccacgtaactatagcgctcagcaatacatg
cgcagcgaagaggagatgtgcgagctgttcgccgatctgcccgaggcgctgcagaacagc
gtagagattgctaagcgttgtaatgtgaccatccgactcggccagtactttctgccgcag
ttccccaccggggagatgtcgacggaggatttcctggtgaagatggcgcacgaggggctg
gaggagcgtctcacgttcctgttccccgatgaggcggaccgtgcccgactgcgccggcct
tacgatgagcgtctggagatcgagctgaaggtgatcaaccagatgggcttccccggttac
ttcctgatcgtgatggagtttatccagtggtctaaggataacggggttccggtggggccg
gggcgcggctccggcgccggctcgctggtggcctattcgctgaagattaccgacctcgat
ccgctggccttcgatctgctgttcgaacgttttcttaacccggaacgcgtatccatgccc
gactttgacgtcgacttctgcatggagaagcgcgatcgggtgatcgatcacgtcgccgat
atgtatggccgtgaagcggtatcgcagatcatcaccttcggtaccatggcggccaaggcg
gtgatccgcgacgtgggacgtgtgctgggtcatccctacggcttcgtcgatcgcatctcc
aagctggtgccaccggatcccggcatgaccctggccaaggccttcgaggcggagccgcag
ctgccggagatctacgaggcggatgaagaggtgcgggcgctgatcgacatggcgcgcaag
ctggagggggtcacccgcaacgccggtaagcacgcgggtggggtggtgatctcgccgacc
aagatcaccgacttcgcgccgctgtactgcgatgccgaggggaatcacccggtcacccag
ttcgacaagagcgacgtggagtacgccgggctggtgaagtttgacttcctgggcctgcgt
accctgaccatcatcaactgggcgctggagatgatcaacgcccgccgtgcgcgccagggg
ctggagccggtggatatcgccgccattccgctcgacgatcagaagagcttcgatatcctg
cagcgcgcggagaccacggcggtattccagctggaatcgcgcgggatgaaggatctgatc
aagcgtctaaagccggactgcttcgaagatatgatcgcgctggtggcgctgttccgcccc
ggcccgctgcagtcggggatggtcgataactttatcgaccgtaagcacgggcgcgaagag
ctctcctacccggaccgtgagtggcagcatgagagtttgaagccggtgctggagccgacc
tacggcgtgatcctgtatcaggaacaggtgatgcagatagcccaggtgctggccggctac
tcgctgggcggcgccgacctgctgcgccgtgcgatgggtaagaaaaagcccgaggagatg
gccaagcagcgctcggtgtttgaagagggcgccaggaacaacggcgtcaacggcgaactg
gcgatgcacatcttcgacctggtggagaagttcgccggctatggctttaacaagtcgcac
tccgccgcctatgcgctggtctcttaccagacgctgtggctgaaaacccactatccggcc
gagtttatggcggcggtgatgaccgccgatatggataacaccgagaaggtggtcgggctg
gtggatgagtgctggcggatgggactgaagatcctgccgccggacatcaacagcgggcag
tatcacttccacgtcaacgatgagggcgagatcgtctacggtatcggcgccatcaaaggg
gtcggggaagggccaatcgaggcgatcatcgaggcgcgcaacagcggcgaacagggctat
tttaaggatctgtttgatctgtgcgcccgcaccgataccaagaagctgaaccgtcggatg
atggagaagctgatcatgtccggcgccttcgatcgcctggggccgcaccgcgcggcgctg
atgagctcgctgagcgatgcgctgaaggccgccgagcagcacgcccgcgccgaggccatc
ggacaggcggacatgtttggtgtgctggcggaagagccggagcaggtagagcaatcctat
ggcagcgtgccgccctggccagcccagatggtgctggacggcgagcgcgagaccctgggg
ctgtacctgaccggccatccgatcacccagtatctgaaagagatcgaacgctatgccggc
ggtggccgtctgaaggatatgcatccgacggatcgtggtaagatgaccaccgccgtgggg
ctggtgctgggggcccgggtgatgacgaccaagcgcggtaaccgcatcggaatgtgtacc
ctcgacgatcgatccggccgtctggaggtgatgctgttcaccgatgcgctggaaaaatac
cagcatttgctggagaaagaccgtatcctgatcgccagcggacaggtcagctttgatgac
ttcagcggcggccttaaaatgatcgcccgcgagttaatggatatcagcgaagcccgtgaa
aaatatgcacgtggacttgccatctcgctgactgacaggcaaattgatgatcagctttta
aaccgtctccgtgaagcgctggaaccacatcgttcggggacgatcccagtacacctgtat
tatcagcgtgcggatgcgcgggcccgggttcgtttcggtgcagcctggcgcgtgacgccg
acggatcgcctgctgctcgatctgcgcacgctggtgggatgtgaacaggtggaactggaa
tttgactaa
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