Electrophorus electricus (electric eel): 113569930 Help Entry 113569930         CDS       T05787                                  Symbol col1a1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism eee  Electrophorus electricus (electric eel) Pathway eee04510   Focal adhesion eee04512   ECM-receptor interaction eee04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:eee00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     113569930 (col1a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     113569930 (col1a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     113569930 (col1a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:eee00536]     113569930 (col1a1) Glycosaminoglycan binding proteins [BR:eee00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113569930 (col1a1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  113569930 NCBI-ProteinID:  XP_026853844 LinkDB All DBs Position Unknown AA seq 1448 aa AA seqDB search MFSFVDIRLALLLSATVLLARGQGEDDRIGSSCTLDGQVYNDRDVWKPEPCQICVCDSGT VMCDEVICEDTSGCTNPVIPPDECCPVCADDEYQEPRVEGPKGERGEKGDRGPAGPPGND GIPGQPGLPGPPGPPGPPGLGGNFAPQMSGGFDEKSGGGMSIPGPMGPMGPRGPPGPPGV SGPQGFTGPPGEPGEAGAPGAMGPRGPAGPSGKNGEDGESGKPGRPGERGPSGPQGARGF PGTPGLPGIKGHRGFSGLDGAKGDSGPAGPKGEAGAPGENGVPGAMGPRGLPGERGRAGP SGAAGARGNDGAAGAAGPPGPTGPAGPPGFPGGPGAKGEVGPQGARGGEGPQGSRGEPGN PGPAGAAGPAGNNGADGAPGAKGGPGAPGIAGAPGFPGPRGPPGAAGTAGAPGPKGNTGE AGATGHKGESGAKGESGAPGVQGPPGPSGEEGKRGARGEPGTAGTRGPPGERGAPGARGF PGADGSAGPKGAPGERGGPGTVGPKGATGEPGRNGEPGMPGSKGMTGSPGSPGPDGKTGS AGPTGQDGRPGPPGPVGARGQPGVMGFPGPKGAAGEAGKPGERGVMGTVGVPGAPGKDGD VGGPGAPGPAGPAGERGEQGPSGPPGFQGLPGPQGATGESGKPGEQGVPGEAGPTGPPGS RGDRGFPGERGAPGVTGPAGGRGSPGAPGSDGAKGESGASGAPGAQGPPGLQGMPGERGA AGLPGLKGDRGDQGAKGGDGTPGKDGIRGMTGPIGPPGPAGPQGDKGESGAAGPVGPTGV RGPPGERGETGAPGPAGFAGPPGADGQPGAKGESGDTGSKGDAGAPGPAGPTGAPGPQGP VGSTGPKGARGAAGPPGATGFPGAAGRVGPPGPAGNSGPPGPPGPSGKEGAKGVRGETGP AGRPGEIGASGPPGPPGEKGNPGSEGATGPSGIPGPQGIAGQRGIVGLPGQRGERGFNGL PGQSGEPGKQGPGGPSGERGPPGPMGPPGLAGPPGEPGREGTPGNEGAAGRDGAAGPKGD RGESGAAGAPGAPGPPGAPGPIGPAGKTGDRGESGPHGPAGAAGPAGPRGPSGPAGARGD KGETGEAGERGMKGHRGFTGMQGPPGPPGPSGESGPAGSSGPAGPRGPAGSSGSAGKDGM SGLPGPIGPPGPRGRTGEIGPSGPPGPPGPPGAPGPSGGGFDIGFIAAPQEKAPDPFRHF RADDANVLRDRDLEVDTTLKSLSQQIENIRSPDGTKKNPARTCRDLKMCHPDWKSGEYWI DPDQGCNLDSIKVFCNMETGETCVYPTQPEIPKKNWYTSKNIKEKKHVWFGEAMTDGFQF EYGGEDSKSEDVNIQLTFLRLMSTESSQNITYHCKNSIAYMDQATGNLKKALLLQGSNEI EIRAEGNSRFTYSVIEDGCTSHTGAWGKTVIDYKTTKTSRLPIIDIAPMDVGAPDQEFGI EVGPVCFL NT seq 4347 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggctggcgctgttgctcagcgcaacagtgcttttggca agggggcaaggcgaggacgatcgcataggcagcagctgtacgttggacggccaggtctac aatgacagagacgtctggaaacctgagccctgccagatctgcgtgtgcgacagcggcact gttatgtgcgacgaggttatctgcgaggacacttccggttgcaccaatcccgtgattcca cccgacgagtgttgccccgtttgcgctgacgacgaataccaagaacccagagttgaggga cccaaaggtgagcgtggtgagaaaggagacaggggtcctgctggtcctcctggtaatgat ggaattcctggacagcctggacttccagggcccccaggcccccctggaccccctggcctt ggcggaaactttgctcctcagatgtctggaggttttgatgagaagtctggtggtggtatg tccatcccaggtcccatgggacccatgggtcctcgtggtcccccaggacctcctggagtt tctggaccccaaggtttcactggccctcctggtgagcctggtgaggctggtgctcctggt gcaatgggtccccgtggtccagctggtccttctggaaagaatggagaagatggggagtct ggcaagcctggtcgcccgggtgagcgtggcccctctggccctcagggtgctcgtggcttc cccggaacccctggacttcctggtatcaagggacacagaggcttcagtggtctagatgga gctaagggagattcaggccctgctggacctaagggagaggctggtgcccctggagagaat ggagttcctggcgctatgggtccgcgtggtctgcctggtgagagaggccgtgctggtccg tctggtgctgctggtgcccgtggtaacgatggtgcagctggggctgctggtcctcctggc ccaactggccctgctggtcctcctggattccctggtggccccggagctaagggagaggtt ggtcctcagggagctcgtggtggtgagggacctcagggttctcgtggtgagcctggtaac cctggacctgctggtgcggccggacctgctggtaacaatggtgctgatggtgctcctggt gctaagggtggccctggtgctcctggtattgctggtgctcctggcttccctggaccccga ggtcctcccggagctgctggtactgctggtgcccctggtcctaagggtaatactggtgag gctggtgctactggacataagggagagtctggtgccaaaggagagtctggagcacccgga gttcagggaccccctggcccttcaggtgaagagggaaagagaggagctcgtggtgagccc ggtactgccggcacccgcggaccccctggcgagcgtggcgctcctggtgctcgtggtttc cctggtgctgatggaagtgctggccctaagggtgcccctggtgagcgtggaggccctgga actgttggacctaagggtgccactggtgagcctggccgcaatggtgagcctggtatgcct ggatccaagggtatgactggtagccctggcagccctggacctgatggaaaaactggatct gctggtcctactggacaagatggccgccctggacccccaggccctgttggagccagaggt cagcctggtgtcatgggattccctggacccaagggagctgctggtgaggctggcaagcct ggtgaaagaggtgtgatgggcactgttggtgttcctggtgctcccggtaaagatggtgat gttggcggtcccggtgcccccggccctgctggacctgctggtgagagaggtgagcaagga ccttctggacctcctggtttccagggactgcctggaccccagggtgctactggtgagtct ggcaagcccggtgaacagggtgtgcctggtgaggctggacctactggacctcctggatcc agaggtgacagaggtttccctggtgagcgtggagcccctggagttactggtcctgcagga ggccgtggctctcctggtgcacctggtagcgatggtgccaagggtgagtctggagcctca ggtgctcctggtgctcagggccctcctggtcttcagggtatgcctggtgagcgtggtgct gcaggtctcccaggtctcaagggtgaccgaggtgaccaaggtgcaaagggcggtgatggt acccctggtaaggatggcatccgtggtatgactggacctattggacctcctggaccagct ggtcctcagggtgacaagggagagtctggtgctgctgggcctgttggacctactggagtc cgtggaccccctggtgagcgtggtgagactggtgccccaggaccagctggatttgctgga ccacctggtgctgatggtcagcctggtgctaagggagagtctggagataccggttctaag ggtgatgctggtgcccctggtcctgctggacctactggagcgccaggacctcagggtcct gtcggttctactggacccaaaggtgctcgtggtgctgctggtcctcctggagctactggt ttccctggtgctgcaggcagagttggacctcctggccctgctggtaattctggcccccct ggacctcctggaccttctggaaaggaaggtgcaaagggtgtccgtggtgagactggacct gctggtcgccctggtgagattggtgcttctggtcctcctggtccacctggtgagaaggga aatcctggatctgaaggtgccaccggaccctctggtatccccggacctcaaggtattgct ggacagcgtggtattgttggtcttcctggacagaggggcgagcggggattcaatggtctc cctggccaatctggagagcctggcaagcagggacctggtggcccctctggtgagcgtgga cctcctggacccatgggacctcctggactggctggacctcctggcgagcctggtcgtgag ggaactcctggtaatgagggtgctgctggccgggatggtgctgctggccccaagggtgat cgtggcgagtctggtgctgcaggcgctcctggtgcccctggacccccaggcgctcctgga ccaatcggccctgcaggaaaaactggtgaccgtggagagtctggtccacatggtcccgct ggtgctgctggccctgctggtcctcgtggcccatctggacctgctggagcacgtggagac aaaggtgagactggagaggctggtgagagaggcatgaagggacacagaggattcaccgga atgcagggacctcctggacctcctggaccttctggtgaatctggacctgcgggatcttct ggccctgctggacctagaggacctgctggatcttctgggtctgctggtaaggatggcatg agtggacttcctggacccattggaccccctggacctcgtggtcgcactggtgaaattgga ccttctggacctcctggaccacctggacctcccggagcccctggaccttccggaggcgga tttgacattggctttattgctgcaccccaagagaaggccccagatcctttccgtcacttc cgtgctgatgatgccaatgtgttgcgtgaccgtgacctggaggttgacactacactcaag tccctgagccagcagattgagaacatccgcagccctgatggcaccaagaagaaccctgca cgcacctgccgtgacctgaagatgtgccatcctgactggaagagtggtgagtactggatt gaccctgaccagggctgcaacctggattccatcaaggtcttctgcaacatggagactggt gagacctgtgtctacccaacacagcctgaaattcccaagaagaactggtacacaagcaag aacatcaaggagaagaaacacgtctggttcggtgaggccatgactgatggcttccagttc gagtatggcggtgaggactccaagtctgaggatgtcaacatccaactcaccttccttcgt cttatgtccaccgagtcctcccagaacatcacataccactgcaagaacagcattgcctac atggaccaggctacaggcaacctgaagaaggctctgctgctgcagggctccaatgagatt gagatcagagcagagggcaacagccgctttacctacagcgtgattgaggatggctgcacg tcacatactggtgcatggggcaagacagtcatcgactacaaaacaacaaaaacatctcgc ttgcctattattgacatcgcccctatggacgttggtgcacctgatcaggaatttggcatt gaagttggcccagtctgcttcttgtaa

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