Electrophorus electricus (electric eel): 113571938
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Entry
113571938 CDS
T05787
Symbol
virma
Name
(RefSeq) LOW QUALITY PROTEIN: protein virilizer homolog
KO
K22910
protein virilizer
Organism
eee
Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113571938 (virma)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
113571938 (virma)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VIR_N
ExoU_C
VPS13_mid_rpt
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
113571938
NCBI-ProteinID:
XP_026856968
LinkDB
All DBs
Position
Unknown
AA seq
1771 aa
AA seq
DB search
MAGDSSMELLFLDTFKHQNAELTNVDVVRFPYGVLITEVRVIPPGIKAHSSLPDSRAFGE
TAPHAFQLDLFFNNVSKPTAPVFDRLGSLEYDENKSIVFRPSGKVNTDGLVLRGWYTCLT
LAVYGSAERSHNRERDSPPPPPPPPTQQHPTASKRTVKHEWENEEQFNGSPPRPQPRGPR
TPPGPPPPDDDDDDTLPVPGPVKEETVERGEDYLEPVSPERGSLPAEDPYSEPEPEEEDE
GPGDEDEDEGRSEGSEAEEEEEEEEEEDGEEEMEDDGEGDDGYEQISSDEEDLESGAFKL
PAFDLDYTPEDLASLPTVQYDPYERELRPLQHFTPPHITCYEAELNRLKATDPQDQTSPW
AESSARLSELLETWGEGPEAERGAGWVTALEEIPALLAKGLSFLSVREPEAQKAQLKVLV
EWVSEALNLDSALAQPIALNLRQLKAGAKLASSLAGCGGPALQALLXXLNALRCLDSIAS
EPAGIEALLRDGLRADEAASGXKAPAXXXXXXXXXXXXXXTAGAAVLQKGHFFEVLMDLQ
RMACSWAERQPAEGEAGEREREGAERESESAERDAEVGEGGEGETLEAEPGSPMDMAALL
ESSSLSEADLERLQGLLEELLHLLETAPHCMVQPPGKAFPTTARITGPPERDDPYPTLYR
YMHAAHFLESLAVVLTSPATCAHIGVVQAVRELMRFLSQTQQGLLFLLSQHESTNVLLRL
LTPLSQLPALLEGDGDEGGAAADGSLDDGFWVWLMHALHALQAVADLNGLEVAEGDSPDV
LTTLHCLYLISFSSTGRSAVTHVLSLETNLSCLVNLLEHHAREGQGEGKARKSVAYNYAC
MLVLLVLQTSADLRMMERYAAPLLAICKADENNAKLQELSKWLEPLEKLRFDISGIPALT
DYIKQNLENLLTSEGVGLITALRVLCHIACPPAPVPGQQKDLKWNQAVIALFSAEGMDTF
VKVLQKLVAVLLLPWRLHGPLGPTAQRLTALSAASCALRLLXXRLDAEELRVQADVADVL
LTFTQAVSEQETGSEETVAGNSWSLMLKEVLSSILSAPENIYSSLNLLSELLPLPLPIQT
TQALSAADVSVAMNTRKLWSVHLLAQARTLQEVLRCVCVSSCPPLLSMFRRVCVQLSDLA
APTALLVMRTLLEQLHEEAQQEGSSSQLTRLLALLDTLVSQRSCKAATLALLGGSVRTEG
RGDGRGEDKLTEVLPCLLAMLLPPADASLTLQQNAELVASIIQSLCDQDISLIVSGSGEV
CVSEAEQLANALPSRDMMPGICDSMSEVLGHTHGTYPLQVTCLRTMMFLTEHDYGLHHLK
SSLKKHNCAVVSLLRRETATFTKESSELLSALLDFLRQILNTDSMDEDMDTRSVALSVID
MKQLLQWRDDSAEHPLPELEKHITELFKEDDSLETLMENVVGLRQILESSGDAPGHTEPE
IEPTLPAPELLQNQFNNRTVYVLSDMLDEQLRAFWLSPFQSDEMETEQDMVKVDLVALAQ
QCCPDLDLKAELERSFLSEPTSPGHSKPSKGFRLGKHKHETFITSSGKSEYVEPAKRAHI
MAAPRGRGRGAFGQVSRPHDIFRQRKQNTSRPPSMHVDDFLAAEFKEVSLPTGLALPKRP
PKGGGAKPPVRGLFTGGTRGRGFQSHTRFFTPPAPKSVLLAGNYPRREGGRGSTWSAPVT
AVTHRGTYSEPRGGQSNFTRPLPSRQPPTGAYRLAPRDRVPRGRGTGLSWLSGGGLGVGG
GGVSGSGRGQGKFSSSGSGGGRGRHVRSFTR
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggattcttcaatggagcttctctttttagatacgttcaaacatcagaatgca
gagcttactaatgtggatgttgtacgatttccatatggtgtattgatcacagaagtcaga
gtcatcccccctggtattaaagctcacagtagcctcccagacagcagagcttttggagaa
acagctcctcatgcattccagttggacctgttcttcaacaatgtctccaagcctaccgcc
ccagtgttcgaccggctgggcagtctggagtacgatgaaaacaaatctattgtcttcagg
cccagtggcaaggttaacacggacggcctggtgttgcgaggttggtacacgtgtcttacg
ctggctgtgtacggctccgctgagcgctcacacaaccgcgagcgagattccccgcccccg
cccccgccccctccaactcagcagcaccccacggcttccaagaggaccgtcaaacacgag
tgggagaacgaggagcagtttaatggtagcccacccagaccacaacccagagggcctcgt
accccacccggccctccacctccagacgatgatgacgatgacacgctacctgtgccaggc
cccgtgaaggaggagacggtggagcgtggtgaggactacctggaacccgtctcccccgaa
cgcggctccctgccggccgaggacccgtactcggagccggagcccgaggaagaagacgag
gggccaggtgacgaagacgaggatgaagggcggtctgaagggagcgaggcagaggaggag
gaagaggaggaggaggaggaagatggtgaggaggagatggaggatgatggagaaggggac
gatggctatgagcagatctccagcgacgaggaggatctcgaaagcggggcgttcaagctg
ccggcctttgacctagactacacacccgaggacctcgcctcgcttccaaccgtccagtac
gacccctatgagcgggagctccgccccctccagcacttcaccccaccccatatcacgtgc
tacgaggccgagctgaaccgcctaaaggcgacggatccccaggaccagacctccccgtgg
gcggagtcctcagccaggctgtcggagctgctggagacctggggggaggggccggaggcg
gagcgcggggcaggctgggtgacggccttggaggaaatccccgccctccttgcgaaaggg
ctgagcttcctgtcggtccgagagcccgaggcacagaaggcgcagctgaaggtgcttgtg
gagtgggtgtcggaggctctgaacctggactccgccctcgcccagcccatcgccctcaac
ctgcggcagctgaaggcgggcgccaagctggcctcgtccctggccggctgcgggggccct
gcgctgcaggcgctgctgnngnagctcaacgcgctgcgctgcctcgacagcattgccagc
gagccggcgggcatagaggcgctgctgagggacggtctccgtgccgacgaggccgccagc
ggctaaaaagccccggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncc
accgccggcgctgctgtcttgcagaagggccatttcttcgaggtgctgatggacttgcag
aggatggcctgctcgtgggcggagcggcagcccgcggagggcgaggcgggcgagagggag
agggagggggcagagagggagagtgagagcgcagagcgagacgccgaggtaggcgaaggc
ggcgagggggagactctggaggcagagcccgggagccccatggacatggccgccctcctg
gagtcgtcctccctgtccgaggctgacctggagaggctgcagggactgctggaggagctg
ctccacctgctggagacagcacctcactgcatggtgcagcccccaggcaaggctttcccc
actacagcacgcatcactgggccccccgagcgagacgacccctatccgacactgtaccga
tacatgcacgccgctcactttttggaatcattagcggtggtcctgacctccccagccacc
tgcgcccacatcggagtcgtgcaagcggtgcgggagctgatgcgcttcctgtcccagacc
cagcagggcctcctgttccttctcagccagcacgagtccaccaacgtcctgctgcgtctg
ctcacgcccctgtcccagctgccggccctgctggagggcgatggggatgagggcggggct
gccgccgacggctccctggacgacggcttctgggtgtggctgatgcatgcccttcacgcc
ctgcaggccgtggctgacctcaacgggctggaggtcgccgagggcgacagtccggacgtc
ctgacgacgctgcactgcctctacctgatcagctttagcagcacgggccgcagtgcggtc
acgcacgtgctcagcctggagacgaacctcagctgcctcgtgaacctgctggagcaccat
gccagagaggggcagggagaaggaaaagctcggaagtcggtggcctacaactacgcctgc
atgttggtcctgctggtgctgcagacctcggctgacctgcggatgatggagcgctacgcc
gcgccactgctcgccatctgcaaagctgacgagaacaacgcaaagctccaagagctcagt
aagtggctggagcccctcgagaagctgcgctttgacataagtggcattccggcgctcact
gactacatcaagcagaacctggagaacctactgacgtccgagggagtgggcctcatcacg
gctcttagggtgctgtgtcacattgcctgtccaccagctcctgtgccaggtcagcagaag
gacctgaagtggaaccaggccgtgatcgccctgttcagcgcagagggcatggacaccttc
gtgaaggtcctgcagaagttggtggcagtgttgctgttgccgtggcgactgcacgggccc
ctgggccccacggcacagcggctgactgccctgtcggcggcgtcgtgcgcgctccggctc
ctgnncngccgcctggacgccgaggagctgcgtgtgcaggccgacgtggccgacgtgctc
ctgaccttcacgcaggcagtcagcgagcaggagacgggctccgaggagaccgtggctggc
aacagctggtccctcatgttgaaggaagtgctcagctccatcctgtctgctccagagaac
atatacagcagtctgaacctgttgtctgagctgctgcctctgcccctgcctatacagacc
acacaggcgctgtcggcagcggacgtgagcgtggcgatgaacacgcggaagctgtggagc
gtgcacctgctggcccaggcacgcaccctacaggaggtgctgcgctgtgtgtgtgtgagc
agctgcccgcctctgctgtccatgttccgccgtgtgtgtgtgcagctcagcgacctggct
gcacccactgccctgctcgtcatgaggaccctgctggaacagctgcacgaggaggcgcag
caggagggatccagttcacagctgaccagactcttagccctgctggacacactcgtgtct
cagcgctcctgcaaggcagccaccttggctctcctgggtgggtctgtacgcaccgagggg
cggggcgatgggcggggcgaagataagctgacagaagtgctcccctgcctgctcgcaatg
ctgctcccaccagcagacgccagcctaacgctgcagcagaatgccgagctggtagcctcc
atcatccagtcgctgtgcgaccaagacatttcgctgatagtgagcggctcgggcgaagtg
tgtgtgtcggaggcggagcagctggccaacgccttgccctccagggacatgatgcctggg
atatgtgacagcatgtcggaggtgctcggacacacacatggcacctaccctctccaagtc
acctgcctcagaacaatgatgttcctgaccgaacacgactacggcctccatcacctgaag
agctcgctgaagaagcacaactgtgcagtggtgtcactgcttcgaagggaaacggcgact
tttactaaagagtcttctgagctgctctcagcactgctggacttcctacgtcagatcctg
aacaccgactccatggatgaggacatggacacacgctccgtggcactgagtgtgattgat
atgaaacagctgcttcagtggcgagacgactcagcagaacacccgctaccagagctggag
aaacacatcacggaactctttaaagaggatgactccctggaaactctcatggagaacgtg
gtgggactccggcagatcctggagagttccggagatgctccaggccacacggagcccgag
atagagcccacgttacctgctccggaactactccagaaccagtttaacaataggacagtg
tatgtcctgtctgatatgctggatgagcagctgagggcgttctggttgtcccccttccag
tcagatgagatggagaccgaacaggacatggtgaaagtggacctggtggctctggcacag
caatgctgtcctgacctggacctgaaggcggagttagaacgctcgtttctcagtgagccc
acttcccctggtcacagtaaaccttccaagggcttcagactgggcaaacacaaacacgag
accttcatcacttccagcggcaagtcagagtacgtggagccggccaagcgcgcccacatc
atggctgccccgcgtgggcggggtcgtggggccttcggccaggtgagcagaccgcacgac
atcttccgccagcgcaagcagaacaccagcaggccgccgtccatgcacgtcgacgacttc
ctggccgccgagttcaaggaggtcagcctccccactggcctagccctgcccaaacgtcca
cccaaagggggaggggccaagccgcctgttagaggcctgttcactggaggaaccagaggg
aggggcttccagagccacacccgcttctttactccacccgcccccaagagtgtactgcta
gcaggcaattaccctcgtcgtgaaggtgggcggggctccacgtggagcgctccagtgaca
gctgtcactcatagaggaacgtacagtgaacctcgaggaggacaaagcaactttacccga
ccactgccatcgaggcaacccccaacaggcgcgtaccgtctggctccccgtgaccgggtc
cccaggggaagaggcactggcctctcctggctaagtggaggtggacttggtgtaggagga
ggcggagtaagtggtagtgggcgtggtcaagggaaattcagcagtagcgggagtggaggc
gggcgtggccggcacgtacgttcattcacccgttag
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