Electrophorus electricus (electric eel): 113578526
Help
Entry
113578526 CDS
T05787
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113578526 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eee03400
]
113578526 (lig4)
Enzymes [BR:
eee01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
113578526 (lig4)
DNA repair and recombination proteins [BR:
eee03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113578526 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
113578526
NCBI-ProteinID:
XP_026867629
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MEGTSKNDGESQMSVAAQVPFIDLCTVLEKIQKAKLRPDKAKFLKDFMDSWRKFHAALHK
DNPNTTDSFYPAMRLIVPPFERERMAYGIKENMLAKLYIEVLGLPKTGPEATKLLNYRAP
TTSQGESGDFSLIAYFVLKKRCPSQGNLSIKEVNNFLDSVAMNNASKQKDLVKKSLLHLI
TQSSALEQKWLIRMILKDMKLGVSKETVLQVFHPDAPELYNVTTDLDKVCRQLHDPSITL
TDVSIGLFSAFKPMLAAVANIPQVEKQMGNQPFYIETKLDGERIQLHKDGDVYKYYTRNS
FEYTQQFGASPLEGSLTPYIHNAFKSHVVTCILDGEMMAYNPTTETFMQKGSKFDIKRLV
DDSELQTCFCVFDVLLVNDRKFGNEPLKKRYDTLQTVFMPVKGRIQLVPKTEAKAMQEVV
NALNEAIDNREEGIMVKNPLSIYKPDKRGEGWLKIKPEYVDGLMDELDLLIVGGYWGKGR
RSGMLSHFLCAVAETPSPGGKPTVFHTVCRIGSGYTMKELYDLGLKLAKHWKVYRKIDPP
PAILCGTEKPEVYIEPQNSVIIQVKAAEIVASDMYKTNCTLRFPRIERIREDKEWHQCMT
LDELSQFCTKASGKLASRHLYIQEDQPDKKKRKLGPKPKRTIGIVDHFRSQDLSAVTKET
DMFEDVEFCVMSGSDTHSKAELEKTVVRCGGIVVQNPGKDTYCVIAGVENMRVKNLIGAD
QYDVVGASWLLECLDRKQVLPWQPRHMIHMSPSTREHFAEEYDCYGDSYYVDTDEQQLRD
VFGRVRLVEMEVASVASVEEKYGWDDLPTSMFRPCCAYFDRYGDIGDPKSFIQGSCLNSR
ALEFRFHGGTVIKRLKEGISHVVVAGEERVQDLRTLRRLFTKKFKIVRETWVTESVKAGH
LLNDNDYLM
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggagggaacttctaaaaatgatggtgaatcacaaatgtctgttgctgctcaagttccg
ttcattgacctgtgcacagtccttgagaagatccagaaagccaaacttcgacctgataaa
gctaaattcttaaaagatttcatggattcatggagaaagtttcatgctgcccttcacaaa
gacaatcccaacactacagactcattctacccagccatgcgtctcatagtgcctccattt
gaaagggagaggatggcatatggtatcaaagaaaacatgttggccaaactctatatcgag
gttttgggcctcccaaaaacaggaccagaagcaactaagcttcttaattacagagctccc
actacatctcaaggggaatcaggagacttttcccttatagcttactttgtcctcaaaaag
agatgcccaagccagggtaacctaagcattaaggaggtcaacaactttttagactcagta
gctatgaataatgccagcaaacagaaagaccttgtgaagaaaagtcttttacatctgatt
actcagagctcagcactggagcagaagtggcttattcgtatgatcctgaaagacatgaag
cttggcgttagcaaggaaacagtgctccaggtattccacccagatgctccagagctttac
aatgtcactacagacttggataaggtatgtagacagctacatgacccctccattacattg
actgatgtgtcaattgggttgttctctgccttcaaacctatgctggcggctgtggccaac
atcccccaagtggagaaacagatgggaaatcagcccttctatattgagaccaagctggat
ggtgaacgcattcaacttcataaggatggggatgtatataaatactatacacgcaactca
tttgagtacacacagcaatttggggcctcgccactagaggggtcccttacaccatacatc
cacaatgcctttaagtctcatgtggtcacctgcatcttggatggggagatgatggcttac
aaccccaccacagagaccttcatgcaaaaaggcagcaaatttgatatcaagaggcttgtg
gatgactccgagttacaaacatgtttttgtgtgtttgacgtactgctcgtcaatgaccgg
aagtttggaaatgagcctctcaagaagcgttatgacaccctccagactgtcttcatgcct
gttaagggccgcatccagctggtgcctaaaaccgaagccaaagccatgcaggaagttgta
aacgccctcaatgaagccatcgacaatcgggaagaggggatcatggtaaaaaaccctctg
tccatctacaagccagataaacgtggcgagggctggctgaagattaaacctgagtatgtg
gatggtctgatggatgaactggatttgctgatagttggaggctattgggggaaaggtagg
cggagtgggatgttgtcccacttcctctgtgccgttgctgaaactccaagtcctggaggg
aagcccacagtgttccatacagtctgtcgcatcggatcaggctacaccatgaaggagctt
tatgatcttggcttgaaactggccaaacactggaaagtttaccgtaagattgaccctcct
ccagccattttatgtggaacagagaagcctgaggtttacattgagccacaaaactctgtg
atcattcaggtcaaagcagcggagattgtagccagtgacatgtataaaactaactgcaca
ttgcgtttccccaggattgagagaatcagagaagacaaagaatggcatcagtgcatgacc
ttggatgagctaagtcaattctgcactaaagcctctggtaagctggcgtccagacatctg
tacatccaggaagaccagccagacaaaaagaaacgtaaacttgggcccaagcccaaaagg
actattggtattgtggaccacttcaggtcccaagacctgtcagcagttaccaaagaaaca
gacatgtttgaagatgtagaattctgtgtgatgagcggaagtgacacgcattccaaggct
gagcttgagaagactgtggtccgctgtggcggcatcgtggtgcagaaccctgggaaggac
acgtactgcgtgattgctggggtggaaaacatgagggtgaagaacctcattggtgccgac
cagtatgatgtggtgggtgcctcctggctgctggaatgtctggacaggaaacaggtgctg
ccatggcagccacgacacatgatccacatgtcgccttctacaagggagcactttgccgaa
gagtatgactgctacggagacagttactatgtcgacacagacgagcagcagctgcgggat
gtctttggcagggtcagacttgtggaaatggaggttgcctctgtggcttcagtagaagag
aagtatggttgggatgacttgccaaccagcatgtttagaccttgttgcgcctactttgac
cggtatggtgacatcggagacccgaaaagtttcatccaagggtcatgcctgaactcccgg
gccctggagttccgctttcatggaggcacagtgataaagagactaaaagaaggcatctcg
catgttgtggtggcaggggaggagagagtacaggacctgaggacactgaggcgtctcttc
acaaagaagttcaagatagttagagagacatgggtaactgaatctgttaaggcagggcac
ttattgaatgacaatgactacctcatgtaa
DBGET
integrated database retrieval system
