Eubacterium eligens: EUBELI_01006
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Entry
EUBELI_01006 CDS
T00908
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
eel
Eubacterium eligens
Brite
KEGG Orthology (KO) [BR:
eel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eel03019
]
EUBELI_01006
03009 Ribosome biogenesis [BR:
eel03009
]
EUBELI_01006
Enzymes [BR:
eel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUBELI_01006
Messenger RNA biogenesis [BR:
eel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EUBELI_01006
Ribosome biogenesis [BR:
eel03009
]
Prokaryotic type
rRNA helicases
EUBELI_01006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
BicD
PhoH
DUF4136
SNF2-rel_dom
Helicase_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACR72007
UniProt:
C4Z094
LinkDB
All DBs
Position
complement(1024319..1025464)
Genome browser
AA seq
381 aa
AA seq
DB search
MKFSDIETISQGVSDYLADNKIVDMTEIQRQTYKHIMDNRDIIACSSTGTGKTLAYLIPI
INRLKSNTHNIQAVVLVPTAELAIQVNNTLKDIFAHMDNTFSSVALIGDVNISRQIDSIK
SNKPAIIIGTPNRIHQLISNKKIKVHEVKTLVLDEADKLFDKTFIQDVEAIRKSLMKFTQ
VLLFSASVDKKTRTNTLCFKPIFIDINSNSGNTSQIPSTIKHISVISDRRERIETLRKII
KAVKPEKAIIFVNSKYDLEESLQKLEYHHYNVASIAGNKDNSAKKAAIENFRSGKIQLLI
ATDIAARGLQIDNIDTVINVNLPEDNKEYIHRCGRCGRNGNTGTCISIITDNELNKIKSY
QKAFHINIVTKKLYQGKLVAK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagcgatatagagactatctctcagggtgtatcagattatcttgcagataat
aaaatcgtcgatatgaccgaaatacagcgtcagacgtataagcatataatggacaaccgc
gatattatagcttgttcatcaaccggaacaggtaagacacttgcatatcttatcccgatt
attaacagattaaagagtaatactcataatattcaggccgttgttcttgttccaacagca
gagcttgcaatacaggtcaataatacgcttaaagatatctttgcacatatggataataca
ttttcatctgttgcattaataggagatgtgaatatatcaagacagattgattctattaaa
tctaataagcctgcaataattatcggaacacctaaccgcatacatcagcttataagtaac
aagaagattaaagtacatgaggttaagactcttgttctagatgaggcagacaagctcttt
gataagacatttattcaggatgtagaagcaattagaaagtctttaatgaagttcacacag
gttcttttattttctgcaagcgtagataagaagacaagaactaatactttgtgtttcaaa
ccaatattcattgatattaacagtaattctggtaatacaagtcagattccttctacaatc
aagcatataagcgttatttctgacagaagggaacgaattgaaactttaagaaagattatt
aaagctgttaaaccagagaaagcaattatattcgttaattccaagtatgatctggaagaa
tcccttcagaagcttgaatatcatcattacaatgtagcttcaattgccggtaataaagat
aattcagccaagaaagctgcaatagagaatttcagaagtggaaagattcagcttcttatt
gcaacagatatagcagccagaggacttcagattgataatattgatacagtaattaatgta
aaccttcctgaggacaataaggaatatattcacagatgtggacgctgtggacgtaatggg
aacacaggaacgtgtatatcaattataactgataatgaacttaacaagattaaatcatac
cagaaagcatttcatatcaatatagtcactaagaagctctatcagggaaaattagttgca
aaataa
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