Eubacterium eligens: EUBELI_01914
Help
Entry
EUBELI_01914 CDS
T00908
Name
(GenBank) transcription-repair coupling factor (superfamily II helicase)
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
eel
Eubacterium eligens
Pathway
eel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EUBELI_01914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eel03400
]
EUBELI_01914
Enzymes [BR:
eel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EUBELI_01914
DNA repair and recombination proteins [BR:
eel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
EUBELI_01914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
DEAD
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
AAA_22
MFD_D3
PRP9_N
IstB_IS21
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
ACR72903
UniProt:
C4Z4L4
LinkDB
All DBs
Position
complement(1979191..1982811)
Genome browser
AA seq
1206 aa
AA seq
DB search
MKAIFEPVYNTAGVEQLNKELAKDGGRTVMVSGCIDTQKLHFSSAIASNYNFQLVITSDE
GKARDMAEDARFFNGGNVMYYPAKDVIFYNADVQGRQIAGERIRCIAAIIDRLNKSDIVK
SGTEKSTEEASDGPLTIVTTIDGISDMLLPVDRFKRAVINLKKGDILDVEDMAKKLTAMG
FERFGMVEAKGQFAIRGGIIDIFSYTDEAPVRIELWDDEIDSIRAFDADSQRSIENYKSY
TVFPATEFLFTEDEIEQGIEKIRHEKDEQMKLFGADKRKRTKEQIEAGNHLNRMFDDALR
TGDYSKFIYTFADRVSSLAEYFPKGDTLIVVDEPVRLKEHSDMTFYEYSESMKNRLESGY
VLPSQTHMFMDMETAVLSMNGHKQLVLTTLEYTPEFFGIDYSMHIEARSISSYNNSFEYL
SDDIRKYKRNKYAVLLVCSSRTRANRIVDDLGRLGIESFYTEDSNKSMAGGLVMVTYGSL
HRGFEYPLQGFVCIAENDIFTEKKRKRVKKKEYDGKNIAGFNELNIGDYVVHENYGIGQY
KGIEKIKVEGVEKDYIKISYADNSNLYVLATQLDRLQKFAGSDVEKKPKLNKIGGSEWGK
TKSKVHSAVEEVAKDLVELYATRQRIEGYQFGPDTVWQQEFEEMFPYEETTDQLNAIEDT
KHDMESRRVMDRLICGDVGYGKTEIAIRAAFKAVQEGKQVAYLVPTTVLASQHFTTFEQR
MKDFPVTVAQLSSFRTSAQNKETIEELKKGMVDIVIGTHRLLSKDVVFKDLGLLIIDEEQ
RFGVTHKEKIKKLKNNVDVLTLSATPIPRTLHMSLAGIRDMSVLEEPPVDRVPIQTFVTE
HNDEMIREAITRELARNGQVYYVYNRVRSIDEAAAHIQELVPDANVAYAHGQMAKRELEK
IMCDFVNGEIDVLVSTTIIETGMDISNCNTMIIEDADRFGLSQLYQLRGRVGRSSRTAYA
FLLYRRDKVLTEVAEKRLSVIREFADFGSGFKIAMKDLEIRGAGNVLGNSQHGHMAAVGY
DLYCKMLNQAVNNLKGIKNEYEFETTIDVDVDAYIPATYIKSEYQKLDIYKRIAALENMD
ELSDMRDELSDRYGSVPSCADNLLMIALIKSKAHKLGMIEIKGGVAHQESGTAVWRTVMT
VYPKAELDPDAIKKLLDEYGGAIQMRVDANPAFIWTVTKKKFTNAKEYLKGLNALMDVFM
ERLMVK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaatatttgagccggtgtataatacagccggtgtggaacaacttaataaagag
cttgctaaagatggtggcagaacagtaatggtaagtggctgtattgacacgcagaagctg
catttttcaagtgccatagccagcaattataatttccagcttgttataaccagtgacgag
gggaaagcaagggatatggcggaggatgccagattctttaacggcggaaatgtaatgtat
tatcctgcgaaagatgtaatattttataacgcagatgtgcagggacgacagattgccgga
gagcgaatcagatgtatagcagccataattgacagattgaataaatcggacattgtaaaa
tctggaacagagaaatcaacagaggaagcttcagacggaccgcttacaattgtgacaacc
attgatggaatatcagatatgcttcttccagtcgacagattcaagcgggcagtcattaac
cttaagaagggtgacatactcgatgtagaggatatggcaaagaaacttacagctatggga
ttcgagagattcggaatggttgaagccaaaggacagtttgccataagaggcggaataata
gatatattttcatatacagatgaagcacctgtgagaattgaattgtgggatgatgagata
gactcaataagggcgtttgatgcagacagccagcgttccattgagaattataagagttat
acggtatttcctgcaacagagttcctttttactgaggatgaaatagagcaggggattgaa
aaaatcagacatgaaaaagacgaacagatgaagctgttcggagcagataaaaggaagcgt
actaaggaacagatagaggctggcaatcatcttaacagaatgtttgatgacgcgttaagg
acaggagattacagcaaattcatatatacatttgcagacagagtgagcagcctggcagag
tatttccctaagggagatactcttattgtcgtggacgaacctgtaaggcttaaggaacac
agcgacatgactttctatgagtacagtgagagtatgaagaacagattagaaagcggttat
gtgctaccaagtcagacacatatgtttatggatatggagacagccgttctttcaatgaac
ggacataagcagcttgtgctgacaacacttgaatacacacctgaattctttgggatagat
tattcaatgcatattgaagcgagaagcataagctcatataataacagctttgaatatctt
tcagatgacataaggaagtataaacgtaataaatacgcagttcttcttgtgtgcagctca
agaacaagagctaacagaattgttgatgatcttggaaggcttggaattgagagcttctat
acagaggacagcaataaatccatggcaggcggacttgtgatggttacttacggaagcctt
cacaggggatttgagtatccgctgcagggatttgtgtgcattgccgaaaatgacatattt
acagagaagaagcgcaagagggttaagaagaaggagtatgatggcaagaatattgccggc
tttaatgaacttaatattggcgattatgttgttcatgagaattacggtataggccagtac
aagggcattgagaagattaaggttgaaggtgttgagaaggattacatcaagatatcttac
gcagataacagcaacctttatgtgctcgcaacacagcttgaccgtctgcagaaatttgcc
ggttcagatgtagagaaaaagccaaagcttaataagattggtggttcagagtggggaaag
actaagtcaaaggttcattcagccgttgaagaagtggctaaagaccttgttgagctgtat
gccacaagacagagaatagaaggataccagtttggaccggatacggtatggcagcaggaa
tttgaggaaatgttcccttatgaggagacaacagaccagttaaatgcgatagaagacacg
aagcatgacatggaaagccgcagggtaatggacagacttatatgtggagatgtgggctat
ggtaagacagagattgcgataagagcagcatttaaggcggttcaggaaggaaagcaggtt
gcttatcttgtacctacaacagtacttgcaagtcagcattttaccacatttgaacagaga
atgaaggactttccggttacggtagcccagttgtcaagcttcagaacctcagcacagaat
aaggagaccattgaggaacttaagaagggcatggttgacattgtaataggcacacacagg
cttctttctaaagacgtggtgttcaaggatctgggacttcttattattgatgaggaacag
cgttttggtgttacacacaaggagaagattaagaagttaaagaataatgttgatgtgctt
acgctcagtgccactccgattccaagaacgcttcacatgagccttgcgggaatcagggat
atgagtgttcttgaagagcctccggttgaccgtgttccgatacagactttcgttacagag
cataatgatgagatgatacgagaggcaatcacaagggagcttgccagaaacggtcaggtc
tactatgtatacaaccgtgtaagaagcattgatgaggcggctgcacacattcaggagctt
gttcctgatgcaaatgtggcatatgcccacggtcagatggctaaacgggagcttgagaag
ataatgtgtgatttcgttaatggtgagatagatgtgttggtgtctacaactataattgaa
acaggtatggatatatccaactgcaacacaatgataattgaagatgcagatcgttttgga
ctttctcagctttatcagctaagaggaagagttggcagaagctcaaggactgcgtatgca
tttttactgtacagaagagataaggtactgacagaggtagcggagaagcgactcagcgta
atcagggaatttgcggatttcggttcgggctttaagattgcgatgaaggatctggaaatc
cgaggtgcaggaaatgtgcttggaaacagccagcatggtcacatggcggctgtaggatac
gacctgtactgtaaaatgcttaatcaggcagtcaacaatcttaagggaattaagaatgag
tatgagtttgagacaacaatagatgtagatgtggacgcttatattccggcaacatatatt
aagagtgagtaccagaagcttgatatatataagagaattgctgcacttgagaacatggat
gaattatcagatatgagggacgagttatcagacagatacggaagtgtgccatcatgcgcc
gacaatctgcttatgattgcgcttatcaagtcaaaggcacataaacttggcatgatagag
ataaagggcggcgttgcgcatcaggaatcaggaacagcagtatggcgtacagttatgaca
gtttatcctaaggctgaattagacccggatgctataaagaagcttcttgacgagtatggc
ggtgcaatccagatgagagtagacgccaatcctgcatttatatggactgtaactaagaag
aaattcactaatgcgaaggaataccttaaggggcttaatgcgttgatggatgtgtttatg
gagaggctgatggtgaagtaa
DBGET
integrated database retrieval system
