Enterobacteriaceae endosymbiont of Plateumaris pusilla: GJT83_01645
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Entry
GJT83_01645 CDS
T07640
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eep
Enterobacteriaceae endosymbiont of Plateumaris pusilla
Pathway
eep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJT83_01645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eep03019
]
GJT83_01645
03009 Ribosome biogenesis [BR:
eep03009
]
GJT83_01645
Enzymes [BR:
eep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GJT83_01645
Messenger RNA biogenesis [BR:
eep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GJT83_01645
Ribosome biogenesis [BR:
eep03009
]
Prokaryotic type
rRNA helicases
GJT83_01645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QJC29603
UniProt:
A0A6H2F6A2
LinkDB
All DBs
Position
complement(341270..342937)
Genome browser
AA seq
555 aa
AA seq
DB search
MTNVEITFAKLGLNNYLLKALNKIGYIKPSPIQKECIPPLLLKKDVLGIAQTGSGKTAAF
SLPLLQNINISNKNTQILILTPTRELAMQVSKAISLFSKFMIGVNVLVLYGGQSYSIQFK
GLRLGPQIIVATPGRLLDHIKRGTVNLLNLKSLVLDEADEMLRMGFIEDVEHIISIIPKG
YQIALFSATMPIQIKNITKRFMNNPHEVRIASNINTIPNINQSYWTSFGRKVDALKKFLE
AEEFDAVLIFVRTKHATNEISEILKQSGYNSAALNGDMNQNVREQTLERFKNGSLDILIA
TDIAARGLDVERISLVINYDIPIDVESYVHRIGRTGRAGRTGKALMFVENREKRFLRNIE
RKIKLHIPEVFLPNSKLLTEKRLIKFSIKINKELKSKDLEKYKVILNKLQYQNNLDSELL
SIALLKIAQGHKPLILPPDPIFIPKKTFYKKSRFIKLNSKLKNKNINNYYKKNYKNKDME
LYSINIGKKDGVEIRHIVGAIINEGEINSHYIGNIKLFPLYSTIELSKIIKKNILKNFKK
IRILNKIINIKSFNS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgttgaaattacttttgctaaacttggtttaaataattatcttttaaaagca
ttaaataaaattggatatattaaaccatctcctatacaaaaagaatgtattcctccttta
ttacttaaaaaagatgtattaggaatagcacaaactggaagtggtaaaacagcagcattt
tctttaccattattacaaaatattaatatatctaataaaaatactcaaattttaatttta
actcctactagagagttagcaatgcaagtatcaaaagcaatatctttgtttagtaaattt
atgattggtgtaaatgtattagtattatatggaggacaatcatatagtattcaatttaaa
ggattaagattaggtcctcaaataattgttgctactcctggacgtttattagatcatata
aaaagaggtactgttaatttattaaacttaaaaagtttagttttagatgaagcagacgaa
atgttaagaatgggttttattgaagatgttgaacatattatatctataatacctaaaggt
tatcaaattgcattattttctgctactatgccaatacaaattaaaaatattacaaaaaga
ttcatgaataatcctcatgaagttagaattgcatcaaatattaatacaataccaaatatt
aaccaaagttattggacttcttttggaagaaaagtagatgctcttaaaaaatttcttgaa
gctgaagaatttgatgcagtattaatttttgtacgtactaaacatgcaactaatgaaatt
tctgaaatattaaaacaatctggttataatagtgcagctttaaatggagatatgaatcaa
aatgttagagaacaaactttagaaagatttaaaaatggtagtttagatattttaattgct
actgatattgctgctagaggattagatgttgaaagaatatcattagttataaattatgat
attccaatagatgtagaatcttatgtacatcgtataggaagaacaggacgtgctggaaga
accggtaaagccttaatgtttgtagaaaatagagaaaaaagatttttaagaaatattgaa
agaaaaataaaattacatattccagaagtatttttacctaattcaaaattattaacagaa
aaaagattaataaaattttcaattaaaataaataaggaattaaaatctaaagatttagaa
aaatataaagtaattttaaataaattgcaatatcaaaataatttagattcagaattatta
tcaatagctttattaaaaatagctcaaggtcataaacctttaattttacctcctgatcct
atttttatacctaaaaaaacattttataaaaaatcaagatttattaagttaaatagtaaa
ttaaaaaataaaaatataaataattactataaaaaaaattataaaaataaagatatggaa
ttatatagtattaatattggtaaaaaagatggtgttgaaattcgtcatattgttggcgct
ataattaatgaaggagaaattaatagtcattatattggtaatataaaattatttccttta
tattctactattgaattatctaaaataataaagaaaaatattttaaaaaattttaaaaaa
ataagaattttaaataaaataataaatattaaatcatttaatagttaa
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