Escherichia fergusonii: EFER_3801
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Entry
EFER_3801 CDS
T00811
Symbol
oxyR
Name
(GenBank) DNA-binding transcriptional dual regulator
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
efe
Escherichia fergusonii
Pathway
efe02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
EFER_3801 (oxyR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efe03000
]
EFER_3801 (oxyR)
Transcription factors [BR:
efe03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EFER_3801 (oxyR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
CAQ91237
UniProt:
B7LUN4
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All DBs
Position
complement(3891253..3892170)
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AA seq
305 aa
AA seq
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MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA
GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL
EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC
VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL
PALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEHLAEAIRARMDGHFDKV
LKQAV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcgtgatcttgagtacctggtggcattggctgaacaccgtcattttcggcgt
gcggcagattcctgccacgttagccagccgacgcttagcgggcaaattcgtaagctggaa
gatgagctgggcgtgatgttgctggagcggaccagccgtaaagtgttattcacccaggcg
ggaatgctgctggtggatcaggcgcgtactgtgctgcgtgaggtgaaagtccttaaagag
atggcaagccagcagggcgagacaatgtccgggccgctgcatattggtttgattccaacg
gttgggccttacctgttaccgcatattatcccgatgctgcaccagacctttccaaagctg
gaaatgtatctgcatgaagcacagacccaccagttactggcgcaactggacagtggcaaa
ctcgattgcgtgatcctcgcgctggtgaaagagagtgaagcatttattgaagtgccgttg
tttgatgagccaatgttgctggccatctatgaagatcacccgtgggcgaaccgcgaatgc
gtaccgatggccgatctggcaggggaaaagctgctgatgcttgaagatggtcactgtttg
cgcgatcaggcaatgggtttctgctttgaagccggggcggatgaagatacacacttccgc
gcgaccagcctggaaactctgcgcaacatggtggcggcaggtagcgggattactttactg
cctgcgttggctgtgccgccggagcgcaaacgcgatggggttgtttatctgccgtgcatt
aagccggaaccacgccgcactattggcctggtttatcgtcctggctcaccgctgcgcagc
cgctatgagcatctggcagaggccatccgcgcaagaatggatggccatttcgataaagtg
ttaaaacaggcggtttaa
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