Effusibacillus dendaii: skT53_30180
Help
Entry
skT53_30180 CDS
T06872
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
eff
Effusibacillus dendaii
Pathway
eff03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
skT53_30180 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eff03400
]
skT53_30180 (mutM)
Enzymes [BR:
eff01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
skT53_30180 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
skT53_30180 (mutM)
DNA repair and recombination proteins [BR:
eff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
skT53_30180 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
DZR
zinc_ribbon_2
zinc-ribbons_6
zf_Rg
Ribosomal_S13
zf-TFIIB
zf-ribbon_3
HscB_4_cys
Zn_ribbon_SprT
RNHCP
Motif
Other DBs
NCBI-ProteinID:
BCJ88033
UniProt:
A0A7I8DCV4
LinkDB
All DBs
Position
2898741..2899589
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETIRRSLEALVVHKTIGDVTVNLPRLIRTPDDVEQFKIMLRQQTIRGVRRRGK
FLLLDIGPYTLVSHLRMEGRYGLYQTGEPIAKHTHLIFHFTDGTELRYQDVRQFGTFDLL
PENNLSAVPGLRKMGPEPLSGEFTPTVLQQKLKNRTGKIKSLLLDQNLVAGIGNIYADEA
LFRAGVHPEREAGLLTKAQIERVYRAVVDVLSESVKLGGSSVKSYVNGFGSTGSYQYHLN
VYGRKDEPCPNCGTPIKKNRVGGRGTHFCPKCQPAPRSRRSR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaactgccggaagtggaaaccattagacgaagtctggaagcgcttgtggtacat
aagacaatcggcgacgtgacggtcaatctgccccgtctgattcgaacaccggacgatgtg
gaacagttcaaaatcatgctgcggcagcaaaccattcgcggcgttcgcagacgcggcaag
tttttgctgttggacatcggtccgtacacgttggtgtcccatctgcgcatggaagggcgc
tacggattgtatcagacaggagaaccgatcgccaaacatacacatctgatttttcatttt
acggatggtacggaactgcgctatcaggacgtaaggcagtttggcacgttcgatttgctc
cccgaaaataacttgtcagccgtacccggacttcggaaaatggggccggagccgctgtca
ggcgaattcacgcccaccgtcttgcagcagaaattaaaaaatcggaccggcaagatcaaa
tcgcttctgttggatcaaaatttggtcgccggcatcggcaacatctacgccgacgaagct
ctgttcagggcgggtgttcatcccgaacgggaagctggattgctcaccaaagcccagatt
gaacgggtataccgggcggtggttgatgttctttccgaatcggtcaagttgggcggttcc
tccgtcaaatcatacgttaacggatttggcagtacaggaagttaccaataccatttgaac
gtgtatggccgaaaagacgaaccctgtccaaattgcggtacacccatcaaaaaaaaccgt
gtcggcgggcggggaacccatttttgtccgaaatgtcaaccggccccccgcagcagacgg
tcccgctaa
DBGET
integrated database retrieval system
