Enterococcus faecalis DENG1: DENG_01177
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Entry
DENG_01177 CDS
T03043
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
efn
Enterococcus faecalis DENG1
Pathway
efn03030
DNA replication
efn03430
Mismatch repair
efn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
efn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DENG_01177 (dnaE)
03430 Mismatch repair
DENG_01177 (dnaE)
03440 Homologous recombination
DENG_01177 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efn03032
]
DENG_01177 (dnaE)
03400 DNA repair and recombination proteins [BR:
efn03400
]
DENG_01177 (dnaE)
Enzymes [BR:
efn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DENG_01177 (dnaE)
DNA replication proteins [BR:
efn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DENG_01177 (dnaE)
DNA repair and recombination proteins [BR:
efn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DENG_01177 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
SSB
tRNA_anti_2
Ssb-like_OB
Motif
Other DBs
NCBI-ProteinID:
AHI40195
LinkDB
All DBs
Position
1021375..1024704
Genome browser
AA seq
1109 aa
AA seq
DB search
MSFPQLHTVTSYSLLSSTVRIRSYVKQAKALGYQTLAITDINVLHGVVEFYEACQEAGIQ
PIIGLRLEYTPAEKEGHSELLLFAKNLKGYQQLMQLSSSKMTTEGPFYLAEHQSLLSDLF
AVTSSAKGEVAQTFFEDEQQAVHAFQQLASYFDPQSLFVEHSFSMNQQRNSALFSFYQRE
QLPGVALQEVRHLTREEGFAVTVLESIKENNQLNITSQTPEIEGLNYLREAETTMEQMLQ
IAGAEVVQNTIQLAENCRVDIPLHQKLLPHFPVPDNQTAGSYLRTLCLEKLPERVPHLNE
VYQKRLEKELTIIHNMGFDDYFLIVWDVMDFCHNNQIVTGAGRGSAAGSLVSYVLSITDV
DPIKYDLLFERFLNPERYTMPDIDLDIPDNRREEVLAYVSQKYGHYHMAQIATFGTMAAK
MVLRDVARVFGLSQSEANRWSAAVPNKLKITLEEAYQESKRMQELVNFSPNNQLLYKTAV
QLEGLPRHVSTHAAGVVISDENLLNLVPLQPGSNEILLTQFTMNDVEKIGLLKMDFLGLR
NLSIIDDTLTAVKRVYNRTIRLNQIPLDDETTLALFRKGETSGVFQFESAGIRNVLRKLG
PTSIEDIAAVNALYRPGPMQNIDVFICRKKGLEQISYPEPSLAPILENTYGIIVYQEQIM
QVAAKMAGFSLGQADILRRAISKKKKDVLDEERNHFVNGALQQGYLQETANQVYDYIERF
ANYGFNRSHAFAYSFIGFQMAYLKVHYPSAFYVALLHSVRHNPTKIKEYIGEARKNKQTI
LQPSINQSHYSFYLNQQQQILFGFSSLKGIRRDFIQNILNERRENGPYKTFDEFLLRIDR
KWLKVENIEPLIAIGAFDEIAPNRRQLAVGLESNIQSILLSGGSMDLLETLKPKEEEIAD
YPLEERLEQEEQYLGVYLSGHPTEEFKKTRLAKQTQLVHELVENQPTKLLIYVKNIRTIR
TKKGEQMAFVDGDDTTGSISLTLFPTVFRQLRQSVEKGQVYYVEGKVERSTYNQELQILV
QRIEKAQQVETSISDETCFIRITKDVEQTDVFQKMKEVLSRHAGHIPVIVYFEKTGKKIV
LNEENWVAHTSASQQQLAYVLGEQNVIFK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttccacaattacataccgttacttcctattcgcttttatctagtacggttagg
attcgttcctatgtaaaacaagcgaaagcgttaggttatcaaacattagcgattaccgat
atcaatgtcttgcatggggtggttgaattttatgaagcatgccaagaagcgggaattcaa
ccaattatcggtttaagattagaatataccccagcagaaaaagaagggcattccgagttg
cttttatttgctaaaaatttaaaagggtatcagcaattaatgcaactatctagcagcaaa
atgacgacagagggtcccttttacttagcggaacatcaatccttattaagtgatttattt
gccgtgacttcgtcagccaaaggagaagtcgcccaaacattttttgaagatgaacaacaa
gcggttcacgctttccaacaacttgcttcatattttgatccccagtcgttatttgttgaa
cattctttttcaatgaatcaacaacgtaattcagcgctcttttctttttaccaaagagaa
caattacctggcgtggctttgcaagaggtacgtcatttaacaagggaagaaggctttgcc
gtaactgttcttgagagcatcaaagaaaataatcaattgaatattacaagtcaaacaccg
gaaatagaaggtctgaattacttgcgtgaagcagagacgacgatggaacaaatgcttcaa
atagctggtgcagaagtggtccagaatacgattcagctagctgaaaattgccgagttgac
attcctttacatcaaaaattattaccgcattttcctgtgcctgataatcaaacggctggt
tcttatttacgcacattgtgtttagaaaaattaccagaaagagtgcctcatctaaatgaa
gtttaccaaaaacgattagaaaaagagttaaccatcattcacaatatgggctttgatgat
tactttttaatcgtttgggatgtgatggacttctgtcataacaatcaaattgttacaggc
gctggccgaggttcagctgcaggctctttagtgtcctatgtgctatcaattacagatgta
gatccaatcaaatatgatttgctttttgaacgttttttgaatccagaacgctacacgatg
cccgatattgatttagatattcctgataatcggcgggaggaagttttagcttatgtcagt
caaaaatatggtcattatcacatggcgcaaattgccacgtttggtacgatggctgcgaaa
atggttttacgggacgttgcacgtgttttcggattgtcccagagtgaagcgaatcgttgg
tcggcagctgtccccaacaagctgaaaattacgttagaagaagcataccaagagtcaaaa
cggatgcaagaattggtcaatttttcaccaaataatcaattgctctataaaacagctgtt
cagctagaaggattgcctcgccatgtttctacgcacgcagcaggtgtggtaattagtgat
gaaaatcttttgaatttggttccgttacaaccaggatcgaatgaaattttattgacccaa
tttactatgaatgatgttgaaaaaattggtcttctgaaaatggatttcttgggcttaaga
aatttatccatcattgatgataccctcacagctgttaaacgcgtctataatcgaaccatt
cgtttaaatcagattccattagatgacgaaacaacgctggctttatttagaaaaggggaa
acaagtggtgttttccagtttgaatctgctggaattcggaatgtattaagaaaattaggg
ccaactagcattgaagatattgctgctgtcaatgccctgtatcgtcctggtccgatgcaa
aatattgatgttttcatctgccggaaaaaaggcttggaacaaattagttatccagagcct
agtctcgcccccattttagaaaatacgtacggaattattgtttaccaagagcagattatg
caagttgctgcgaaaatggctggcttctctttagggcaagctgacattttacgtcgggcc
attagtaaaaagaaaaaagatgtgctagatgaagaacgaaatcattttgttaatggtgcg
ctacaacaaggctatctccaagagacagctaaccaagtgtacgattatattgagcgcttt
gctaattatggctttaaccgctcgcatgcatttgcctattcctttattggttttcaaatg
gcttacttgaaggttcattatccaagtgctttttatgtcgcattgttgcactctgttcgt
cataatccaacaaaaattaaagaatatattggcgaagctagaaaaaacaagcagacgatt
ttgcagccgtcaattaaccaaagtcactacagcttttacctaaatcagcaacagcaaatt
ttatttggttttagttctttaaaaggaatccgccgagacttcattcaaaatattttaaat
gaacgccgagaaaatggaccgtacaaaacgttcgatgagtttcttttgcgaattgaccgt
aagtggttgaaagttgaaaatatcgaaccattgattgccatcggtgcatttgacgaaatt
gcgcccaatcgccgtcaattagcggtaggtttagagagtaatatccaaagtattcttctc
agcggtggtagtatggatttgttagaaacgttgaagcccaaggaagaagaaattgccgat
tatccgctagaagagcgactagaacaagaagaacaatatttaggggtctatttatcagga
catccgacagaagagttcaaaaaaacacgcttagccaagcaaacgcaacttgttcatgaa
cttgttgaaaatcagcccacgaaattattgatttatgtcaaaaacattcggacgattcgg
accaaaaagggagaacaaatggcctttgttgatggggatgatacaacaggaagtatttca
ctaacgttgttcccaactgtttttcgccagttaagacagagtgtcgagaaagggcaagtt
tattatgtggaaggaaaagtggaacgcagtacgtacaatcaagaattgcaaatattggtt
caacgaatagaaaaagcgcaacaagtagaaacatcaattagtgacgaaacgtgttttatc
agaattacaaaagatgtcgaacaaacggacgtttttcagaaaatgaaagaggtactcagt
cgtcatgctggacacattccagtgattgtctattttgaaaaaacaggaaagaaaatagta
ttaaatgaagaaaattgggtcgctcatacaagcgctagtcagcaacaattagcttacgtt
ttaggcgagcaaaacgtcattttcaaatga
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integrated database retrieval system
