Epinephelus fuscoguttatus (brown-marbled grouper): 125890965
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Entry
125890965 CDS
T08419
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03022
Basal transcription factors
efo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125890965 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
125890965 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125890965 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
efo03400
]
125890965 (gtf2h2)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125890965 (gtf2h2)
DNA repair and recombination proteins [BR:
efo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125890965 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
DZR
Motif
Other DBs
NCBI-GeneID:
125890965
NCBI-ProteinID:
XP_049435868
LinkDB
All DBs
Position
LG6:complement(7093172..7105804)
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHGQVRLGMMRH
LQVVIDCSRTMEDQDLKPNRLTSTLKLMETFVDEYFDQNPISQLGIIITKNKRAEKLTDL
AGNPKKHTAALKKAVDTVCVGEPSLYNSLNLAIQTLKHMPGHTSREILIILSSLTTCDPA
NICDLIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGLYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTVASLTDQDAKPSFSMSHLDSSSGGGLTLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFIESPVEELQKERFCQACQGELKDKSIFTC
PSCRNAFCMECDLFIHDSLHCCPCCIHNLSTS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagccaagcgctgggaagggggctatgagaggacatgggag
gtgctgaaggaggacgaatctggctcactgaaagccacagtggaagagattctgttccag
tccaaaaggaaaagggtgatcgagagccatggacaagtgaggcttggaatgatgcgtcac
ctccaagtggtgattgactgttcacgaactatggaagaccaggacttgaaaccaaaccgc
ctcacttcgactttgaagctgatggaaactttcgttgatgagtatttcgaccaaaacccc
atcagtcagctgggcattatcatcacgaagaataaaagggcggagaagctgactgacctg
gcaggaaatccaaagaagcacactgctgctctgaagaaagcagtggacactgtgtgtgta
ggagagccatctttgtacaactctcttaacctggccatacagaccctcaagcacatgcct
ggacacacgagtcgggagattctgatcatactcagcagcctcacaacatgtgacccagcc
aacatctgtgacctgattaagaccctgaagtctctgaaggtgcgggtatctgtgatcggc
ctgtcagcagaggtcagggtgtgtacagtattgaccagggagacgggcggcttgtaccat
gttatcctggatgagagtcacttcaaagagctgctgatgctgcatgtcaaaccacctcca
gccagttcctcgtccgaatgctctttaatacgcatgggttttcctcagcacaccgtcgcc
tctctgactgaccaggatgccaagccgtcattcagcatgtctcatctggacagcagcagt
ggtggtggtctgactctgggaggatacttctgtccgcagtgccatgccaagtacacagag
cttcctgtggagtgtaaagtctgtggtttgactctggtgtcagctccccacctcgccaga
tccttccaccacctcttccctctccaagcctttatagagagtcctgtggaggagctccaa
aaagagaggttctgtcaagcttgtcaaggggaattgaaagataaaagtatattcacctgt
ccatcatgtagaaatgcattctgtatggagtgtgatctcttcatccatgactcactgcac
tgctgcccctgctgtattcacaatctgagcacctcctga
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