Epinephelus fuscoguttatus (brown-marbled grouper): 125890993
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Entry
125890993 CDS
T08419
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125890993 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125890993 (ttc37)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
125890993 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
TPR_11
TPR_17
TPR_8
TPR_12
TPR_9
TPR_7
ANAPC3
ANAPC8
PknG_TPR
TPR_15
Coatomer_WDAD
Fis1_TPR_C
Loricrin
Motif
Other DBs
NCBI-GeneID:
125890993
NCBI-ProteinID:
XP_049435906
LinkDB
All DBs
Position
LG6:18800760..18816689
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKTALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQAQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKAELPNIYQKLVELYASSDKNKCYEMIN
KLSEIYQSEKEYLKLAKVWLQLIQVKEEEAVDKKELLQLWLQMTQLLSDCHNEGEQDNET
QQHLITAFEKAMVLMDPVPGEEHKKASADYIKCLSKLPQEEAKMKEACESMLSHYPNQSY
PLEVLCSHYLKTGVQDEDAVSCFSRLLDLAPNSGLGHLGLGTKALQEGRFKDAIKNLAQG
LKKMSSSTGWCSLAEAQFKMQRYADSAVSCSQGLTVCASGDKELRVKLLKLKLEALVRSG
GEKAADQALETFSQIPVSEKDPVILALQGRAHLNKGQTDEALKLSSELVVSNPNLAQGFE
LRGLAQLAQGQQQLAEESFLKAVSQSPDCGEYYFLLGRLYWDMGEETRKDRSKAHTHLLK
AAKLDPHLGCVFRYLGHYYREVAKDLGRARGCYKKAFEIDNDDTESGAASVDLSMEHNDM
ETALAILQSVIEKATPGSAKWAWMRRGLYYLKVGEHQQAVADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACT
AVSTVSPNRVQVLVPAPLAGLDPNIQSHTLNQVQLLKVGERCYARALKLMSEVPSLWYDL
GLNYYRQSSLTCPTDGDQNSPSHLLEKAQQCLKKAIMMDSGNHSYWNALGVVSMSKGLEN
FALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELNTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQALQAYRRAVDLLQSMSSTEELAFA
LGSYGRALCTVGQSEEAVRVYNSTPLQELSDLAGLALAYCRAGLIPESISAYERALAVAS
SEKDKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPISESLLCLCALGLVHRDATLAA
AALTELLKQGSASGNVIEQRCLLTCALLALQGNYSAVQREASRAIHSNPGNPSLWALLSR
LVPQYYPKKANGGAVAGHVACLSSMTQGKRALLYSGVNQLAGGRHSGEDSHRNALKTMQR
AVLLCPDDPATWAGLMAACHTENTSCYLSGSAPCRQGLEQTLMSVVSEKVHNVEEIERPL
AQSLEGWVLQQAVTGLMLGGQLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLVADGG
AVLPDSVLEQLSNTVIMNPTNLGAWHWLAEVYRSQGLLVQAVMAYKQSLQLASQLGLHSS
QVSSLLRLALLALGPCMAGVPGDDWKNMIQEATTEVLKLGSSPMAQLFQGLLQYVTKMGA
RETRRLLERVAYAQDFPVTVVQVASWYLLRHLHAKNDEELMNVLLHHAKMNGDQRLLEFN
SLLASSSA
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaaagaagtgaaaacagcactgaaaagtgccagagaggccatcaaaaacaag
gagttcaaagaggccctaaaacactgcaaggctgttttgaaactagagaagaacaattat
aatgcatgggtattcatcggcttggcagccagtgaactggagcaaccagatcaggcacag
acggcctataaaaaggctgtggagctggagcctgagcagctgctggcatggcagggcttg
gcaaatctttatgagaagactgatcagtgggatttcaaagctgagctgccgaacatctac
cagaagcttgttgagctgtatgcaagctctgacaaaaataaatgttatgagatgatcaat
aagctgtccgagatctatcagtctgaaaaggaatatttaaagttggcaaaggtttggctg
cagctcatccaggtgaaggaggaagaggctgtggacaagaaagagttactgcaactgtgg
ctacagatgacccaactcttgtcagactgccataatgagggagagcaggacaatgaaact
cagcagcatttaatcacagcatttgagaaggccatggttctcatggatcctgtaccagga
gaggagcataagaaggcctcagctgactatatcaaatgtctttctaaactgccacaagaa
gaagccaaaatgaaagaggcatgtgagtccatgctgtcccactaccccaaccaaagttat
cctcttgaggttctgtgttcacactacctcaaaacaggtgttcaggatgaggatgcagtc
agctgtttctcccgtctcctggatctggctcctaacagtggattaggtcacttgggactg
ggaaccaaagcactgcaagaaggaaggtttaaagatgctattaagaaccttgcacaaggg
ttgaagaaaatgagctccagcacaggatggtgcagcctggctgaagctcagtttaaaatg
cagagatacgcagacagtgctgtatcatgctctcaaggtctgaccgtgtgtgcttctgga
gacaaggagctgagggtcaaactgctgaagctgaagctagaggctttggtcaggagtgga
ggagagaaggctgcagaccaggctttggagacattttcacagatcccagtttctgaaaaa
gacccagtgatattagcccttcaaggacgtgcacacctcaacaagggacagactgatgaa
gcacttaagttgtcatcagaactggtggtctcaaaccctaacctagcccaggggttcgaa
ctgagaggactggcacaactagctcagggtcagcagcagctggcagaagagagtttccta
aaggcagttagccagagcccagattgtggagagtattatttcttgctgggacgactctac
tgggacatgggagaagagacccgtaaagacagaagcaaagctcatacacatttgctcaag
gctgcaaagttagacccacaccttggttgtgtattccgctacctcggacattattaccgt
gaggtggcaaaggatcttggccgggcacggggttgctataagaaggcctttgagatagac
aacgatgatactgagtctggagctgcctcagtggatctcagtatggagcacaatgatatg
gaaactgccttagcaatacttcagtcagtgattgagaaagccactccaggctcagctaaa
tgggcttggatgagacgagggctatattacctgaaggtcggagagcatcagcaagctgta
gctgacctgcaggcagcgctgagagcagacccagaggactgggtatgttgggagtgttta
ggcgaggcctacttaaaccgccggagcttcacagcagctctgaaggcctttggtaaggcc
catcagcttcagccctcctccatctacagtgtctaccaggctgctgctatcaaacagacc
ctgggcaagttcaaagaggcggttgcagagtatttgcagatcacggcacagcaggactat
gttcctgctcttaaaggtcttggggagtgccagctgtctctggcaaaaagtttaatggaa
gactgtagagatgggggagccatcgacctcattcagcaagccatacaaaacctcttcaga
gctgtagagctgcgtccagatctgtcctgtctgtggaagctgctgggagatgcatgtact
gccgtcagcaccgtgtctccaaacagagtccaggttctagtgcccgcccccctggctggt
ttagaccccaacatccagagccacacactgaaccaggtccagctacttaaagttggtgag
agatgttatgcccgagctttgaagctgatgtctgaggtccccagcctttggtatgaccta
ggactcaactattaccgccagtcgagcctgacctgccctacagatggagaccagaactct
ccatctcatctcctggagaaggcccagcagtgtttaaaaaaggctatcatgatggacagt
gggaaccacagctactggaacgccctgggagtggtttctatgagcaaaggtcttgagaac
ttcgctctggctcagcattgcttcatcaagtccatacaagttgaaccaaataatgttgtt
gcttggaccaaccttggtaccttgtatttgaagaaggacaatatagagcttgcacacgag
gccttcaagattgcccagtcactggagccgctttatgtcaactgctggatcggacaggcg
ctgatagcagagagagtgggaagctatgacaccatggatcttttcaggcacaccactgaa
ctcaacacacatatggagggagtgaaaggttatgcctactgggtatgttccaccctgctg
gataagagcaacagagactctgagctgtaccgctacaacatagtacagatgaatgccatc
tctgctgctcaggtggcactcagcaagtacacagagaggatccagtctgaccctgatgcc
ttcatcatgcttggctacctgaatgagcatctgcagctgaagaggcaggccttacaggcg
tacagaagagctgttgatctgcttcagtccatgtcctcgacagaagagctggcttttgct
ctgggcagctatggccgtgccttgtgcaccgtaggccagtcagaggaggcagtgcgtgtt
tataattccactccactgcaggagctcagtgatttggctgggctggctctggcctactgc
agggcaggacttatcccagagagcatcagcgcctatgaacgtgccttagctgtggcttcc
agtgagaaggacaaggcttacatcttgacagctctggcgttgcttcagcaccggcagggt
aacctagactcagccaagactctgctgtttaaatgctcgatgttaaaggagccaatctca
gagtctctgctgtgtctatgtgccctgggattggtgcacagggatgctacactagctgct
gctgccctgactgagctgctaaagcaaggttcagcctctgggaatgttatagaacagcga
tgtctactcacctgcgccttgctcgccctgcagggtaactacagcgcggtgcaaagagag
gcttcccgagctatacacagcaatcctggaaacccatctctgtgggctctgctgtccagg
ctggtaccacaatattatcccaagaaggcaaatggtggagcggtggctggtcacgttgcc
tgtctctccagtatgacccaaggaaagagggcgctgttgtacagtggcgtgaaccagctg
gctggtggaagacactctggagaggacagtcacaggaatgcactgaagactatgcagaga
gctgtgttgctttgtcctgatgatccggcaacatgggcaggattaatggctgcctgtcac
acagaaaacacctcctgttatctttcaggctctgctccctgtagacaaggcctggagcaa
accctcatgtcggtggtgtctgagaaagtgcataatgtggaggagatagagcgtcctcta
gctcagagtctagagggttgggtgctacaacaggcagttactggtctcatgctgggggga
cagctggagcaggcagaagctctttgctcacaggtgctgaatgtttctccagaacaccca
gcagtgatgctgtcgctgaggcaggtacagtgtcagcgcctccttgtggccgatggtggt
gctgtcctcccagactctgtgctggagcaactaagcaacactgtgattatgaaccccacc
aaccttggcgcttggcactggctggctgaggtgtatcgtagccagggcctcctggtccag
gcagtcatggcttacaagcagagtctgcagctggcctcacagctcggcctgcacagcagc
caggtatccagcctgctccgactagccctgcttgccctgggaccttgtatggctggtgtc
ccaggagacgactggaaaaacatgatccaagaagccaccactgaggtcttgaagctgggt
tcatcccctatggcccagcttttccagggtctgctccaatatgtgaccaagatgggtgct
agggaaacaaggcgtttgttggagagggtggcatacgcccaagacttcccagtgacagtg
gtgcaggtggccagctggtacctcctcagacacttgcatgcaaaaaacgatgaggaacta
atgaatgtccttttgcaccatgccaaaatgaatggagatcaaagactgctggagtttaat
tcactgcttgcctcttcttcagcttga
DBGET
integrated database retrieval system
