Epinephelus fuscoguttatus (brown-marbled grouper): 125895841
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Entry
125895841 CDS
T08419
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125895841
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125895841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
PRP1_N
Aida_N
Motif
Other DBs
NCBI-GeneID:
125895841
NCBI-ProteinID:
XP_049443950
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Position
LG10:complement(35553361..35555397)
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AA seq
550 aa
AA seq
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MAQKRVQLDQKTFSCSICLDLLKDPVTTPCGHSYCINCIQSFWDGEDEKKVHSCPQCRQS
FTPRPVLLKNTMLAAVVEALKKTGLQTAPAGHCYAGPEDVACDVCTWRKRKAVKSCLQCV
ASYCEQHLQPHFELFEKHKLVEPCKKLLDNICSRHGEVMKLFCRTDQQCICCFCSVDEHK
GHDTVSAAAESTKRQKELEVSRQNIQQRIQDREKDVRLLQQEVEAFNGSADKAVEDSEKI
FIELIRLMEERRSDVRQQVRSRQKTELSQIKELQEKLEQEISELKRKDAELKKLSQTEDH
NQFLHNFPSLSLLSDSLSINIRPLRYFKYVTAAVSEVRDKLQEVLREKWTNVSLTVKAVE
VLPSQPEPKTRAEFLKYSHEITLDPNTAQYKVLLSEGNRKAKFKRKIQPYPDHPDRFFGW
SQVLSEEGLTGRCYWEVEWSGSGVHIAVAYKSISRLGNPFGQNDKSWALQCFPDCYYFWH
DKVRTPVSGPQSSRVGVHLDHSAGILSFYSISETMTLLHRVQTTFLEPLYVGLWLSHSCV
RNCAELCKLK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaagagttcagctggaccaaaaaaccttttcttgttccatctgtctggat
ctactgaaggatccggtgactactccctgtggacacagctattgcatcaactgtattcaa
agcttctgggatggagaggatgagaagaaagtccacagctgccctcagtgtaggcagagc
ttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagctgtagtggaggcactg
aagaagactggactccaaactgctcctgctggtcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcacttggagaaaacggaaagccgtcaagtcctgtctgcagtgtgtg
gcctcttactgtgagcaacacctccaacctcattttgagttatttgaaaaacacaagctg
gtagagccctgcaagaagctcctggacaacatctgttctcgtcatggtgaggtgatgaag
ctgttctgccgcactgatcagcagtgtatctgttgtttctgctctgtggatgaacataaa
ggccacgacacagtgtcagctgcagcggaaagcactaagaggcagaaagagctggaggtg
agtcggcaaaacatccagcaaagaatccaggacagagagaaagatgtgaggctgctccaa
caggaggtggaggctttcaatggctctgctgataaagcggtggaggacagtgagaagatc
ttcattgagctgatccgtctcatggaggaaagacgctctgatgtgaggcagcaggtcaga
tcccggcagaaaaccgaattgagtcaaatcaaagagcttcaggagaagctggagcaggag
atcagtgagctgaagaggaaagacgctgagctgaagaagctctcacaaacggaggatcac
aaccagtttctacacaacttcccctccctgtcactgctcagtgactcactgagcattaat
atccgtcctctgcgctacttcaagtatgtgacagcggctgtgtcagaagtcagagataaa
ctacaggaagttctgagggagaaatggacgaacgtctcactgacagtgaaggcagtggag
gttttaccatcacaaccagagcctaagaccagagctgagttcttaaaatattcgcatgaa
atcacattggatccaaacacagcacaatacaaggtgttattatctgaggggaacagaaag
gcaaaattcaagaggaagatacagccttatcctgatcacccagacagattctttggatgg
tctcaggtcctcagtgaagagggtctgactggacgttgttactgggaggtggagtggagt
gggagtggggttcatatagcagtcgcatacaaaagtatcagcaggctgggtaatccattt
ggacaaaatgacaaatcttgggcattacagtgtttcccagactgttattacttttggcac
gacaaagtccgaacacccgtctcaggtccgcagtcctccagagtaggagtgcacctggat
cacagtgcaggtattctgtccttctacagcatctctgaaaccatgactctccttcacaga
gtccagaccacattccttgagcctctctatgttggactttggctgtctcattcttgtgta
agaaactgtgcagagttgtgtaaactcaaatag
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