Epinephelus fuscoguttatus (brown-marbled grouper): 125901950
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Entry
125901950 CDS
T08419
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03013
Nucleocytoplasmic transport
efo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125901950 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
125901950 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125901950 (thoc1)
03041 Spliceosome [BR:
efo03041
]
125901950 (thoc1)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125901950 (thoc1)
Spliceosome [BR:
efo03041
]
Complex C
Other components
EJC/TREX
125901950 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125901950 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
125901950
NCBI-ProteinID:
XP_049453952
LinkDB
All DBs
Position
LG15:38365643..38373828
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AA seq
654 aa
AA seq
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MSPSLFNFVEAKDKFTASARHALLGKNVKPLINTFNQFPGNETEKKTTLDQALRGVLGDQ
IVEQKASCDEYLSLIYLSIDAVSEGICSATTPFLLLGDVLDCLPLDQCDRIFSFVEENVS
TWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNVTVFNKNEQESTLGQKHTEEKEEGMEVEEGEMGEDDAPAPCSIPIDYNLYRKFWTL
QDYFRNPVQCYEKFSWMTFLKFSDETLAVFKSYKLDDMQASKRKLEELRASGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQTTWIEETTKLV
YQLLREIPPDGDKFANMVEHILNTEENWNGWKNEGCPSFVKERTVDDKPKRPTRKRQAPE
DFLGKGPDRKIFMGNDELTRLWNLNSDNMEACKSDSREFMPSLDEFFAEAIEQADPANMV
EEEYKVVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKLAKELPKDIPSE
EIKTGEEDDDDNGDNLLKDSNDSPSIQSKMVTNQQMDDIAAKLGAQWKTLASHLEMKAAE
LREIETDSEDVDMQAKLLLVAWQDREGTQATVESLVTALNAAGFSQIADSLSEA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgtccttatttaattttgtcgaagctaaagacaaatttacggcgtctgccaga
catgctctgcttgggaaaaacgtcaaacctttgattaacactttcaaccagttccctggg
aatgagacagaaaagaagaccacactcgaccaggctctgaggggtgtccttggtgatcag
attgttgagcagaaggccagctgtgatgaatacttgtctctcatctatctgagtattgat
gcggtctcagaaggtatctgctctgctacaactcctttcctgctgctgggagatgtactg
gactgtcttcctctcgaccaatgtgacagaatattctcctttgtggaggagaatgtttcc
acctggaaatcgaactctttttacactgctgggaagaactacttgttgaggatgtgtaat
gatcttctaaggaggctgtccaaatcccagaatactgttttctgtggtcggatccagctt
ttcctggcacgtctcttccctctgtctgaaaaatcaggtctcaatctgcagagccagttt
aatctggacaatgtcacagtgttcaacaaaaatgaacaagagagcacgctcggccagaag
cacacagaagaaaaggaagaaggcatggaggtcgaggaaggagaaatgggagaggatgat
gctcctgcaccgtgctccattccaattgactacaacttgtacagaaagttctggacgctg
caggactacttcagaaaccccgtgcagtgttacgagaaattctcctggatgacatttctc
aagttctcagatgagacgttggcagtgttcaagagctacaagttggatgacatgcaggcc
tctaagagaaagctggaggagctgagagcatctggaggagaacacgtctactttgccaag
tttctcacaagtgagaagctgatggacctgcagctcagcgacagcaacttcaggcggcac
attctgctgcagtacctcatcctcttccagtacctgaagggtcaggtcaagttcaaaagc
tccagctgtgtcctgaatgatgaccagactacgtggattgaagagacaactaaactggtt
tatcagctgctgagagagatccctcctgatggagacaagtttgccaacatggttgagcat
atcctcaacacagaggagaactggaatggctggaaaaacgagggatgcccgagctttgtg
aaagaaaggacagtagatgacaaacccaagagacccaccaggaagagacaagctccagaa
gacttccttggaaaagggccggaccgcaagatattcatgggaaatgatgagttgacccgg
ctgtggaacctgaactctgacaatatggaggcctgcaagtcagacagcagggagttcatg
ccatcgctggatgaattcttcgcggaggccattgaacaggctgaccctgctaacatggtg
gaggaagagtacaaggttgtgcggaacccaaactatggctggcgcgcgctgaggctgctg
tccaggagaagtcctcacttctttcaaccaaccaaccagaagttcaagagcctggcagac
tacctggacagcatggtcagcaaactggccaaagaactgccgaaggatattccctctgaa
gagatcaagacaggagaggaggacgatgacgataacggagacaatctgctcaaagacagt
aatgacagtccgagcatacaaagcaagatggtgacaaaccagcagatggatgacatcgca
gccaaactgggagcgcagtggaagacattagcgtcccacttggagatgaaggcagcggag
ttgcgcgagatcgaaacggacagcgaagacgttgacatgcaggccaaactgctgctcgta
gcctggcaggacagagagggcacacaagctactgtggagagcctggtcacggcgcttaac
gctgcaggattctcccagattgcagacagcctcagtgaggcttaa
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