Eptesicus fuscus (big brown bat): 103294762
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Entry
103294762 CDS
T09083
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X4
KO
K13126
polyadenylate-binding protein
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03015
mRNA surveillance pathway
efus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103294762 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
103294762 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103294762 (PABPC4)
03041 Spliceosome [BR:
efus03041
]
103294762 (PABPC4)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103294762 (PABPC4)
mRNA cycle factors
Stress granule specific factors
103294762 (PABPC4)
Spliceosome [BR:
efus03041
]
Complex C
Other components
Complex C specific factors
103294762 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_7
RRM_occluded
RRM_3
ApbA_C
Motif
Other DBs
NCBI-GeneID:
103294762
NCBI-ProteinID:
XP_008149393
LinkDB
All DBs
Position
9:complement(25637293..25653667)
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AA seq
615 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPTLRHLAPTGVPTAVQNLAPR
AAVATAAPRAVAPYKYASSVRSPHPAIPPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQ
MLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAK
KEAAQKVGTVAAATS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgccgccagcagctaccccatggcctccctgtacgtgggtgacctgcactcg
gacgtcaccgaggccatgctgtatgaaaagttcagccctgcggggcctgtgctgtccatc
cgggtctgccgcgatatgatcacccgccgctccctgggctatgcctacgtcaacttccag
cagccggccgacgcggagcgggccttggataccatgaacttcgatgtgattaagggaaag
ccaatccgcatcatgtggtctcagagggacccctctttgagaaaatctggtgtggggaac
gtcttcatcaagaacttggacaaatctatagataacaaggcactttatgatactttttct
gcgtttggaaacattctgtcctgcaaggtggtgtgtgacgagaacggctctaagggttat
gctttcgttcacttcgagacccaagaggctgcagacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcggaaagagcgggaa
gccgagcttggggccaaagccaaggaattcactaatgtgtatatcaaaaactttggggaa
gaggtggatgatgagagtctgaaagagctgttcagccagtttggtaagaccttaagtgtc
aaggtgatgagagatcccactgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccaataaggctgtggaagagatgaatggaaaagaaatcagtgggaaagtc
atttttgtaggccgtgcacagaagaaagtggaacggcaggccgagttaaaacggaaattt
gaacagctaaagcaagagagaattagtcgatatcagggggtgaacctctacattaagaac
ttggatgacactattgatgatgagaagttaaggaaagagttttctcctttcggatccatc
accagtgctaaggtaatgctggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggctaccaaagcagtcactgagatgaatggacgcatcgtgggctcc
aagccactgtatgtcgccctggcccagaggaaggaagagcgaaaggctcacctgaccaac
cagtatatgcagcgggtggctggaatgagagcactccctgccaatgccatcttaaatcag
ttccagcctgcagctggtggctactttgtgccagcagttccacaggctcagggaaggcct
ccatattatacacctaaccagttagcacagatgagacctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
actcttcgccatctggctccaactggtgttcccacagctgtgcagaacttagcacctcgt
gctgctgtggctactgctgctcctcgggctgttgcaccgtacaagtatgcctccagtgtc
cgcagccctcaccctgccataccacctctgcaggcaccccagcctgcggtccatgtgcag
gggcaggagcccctgaccgcctccatgctggccgcagcacccccccaggaacagaagcag
atgctgggcgaacgtttgttccctctcatccaaaccatgcattcgaacctggctggaaag
attacgggaatgcttctagagatcgacaactccgagctgctgcacatgctggagtccccc
gagtctctccgctccaaggtggatgaagctgtggcagttctgcaggctcatcatgccaag
aaagaagctgcccagaaggtgggcactgttgctgctgctacctcttag
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