Eptesicus fuscus (big brown bat): 103297791
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Entry
103297791 CDS
T09083
Symbol
LIG1
Name
(RefSeq) DNA ligase 1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03030
DNA replication
efus03410
Base excision repair
efus03420
Nucleotide excision repair
efus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103297791 (LIG1)
03410 Base excision repair
103297791 (LIG1)
03420 Nucleotide excision repair
103297791 (LIG1)
03430 Mismatch repair
103297791 (LIG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efus03032
]
103297791 (LIG1)
03400 DNA repair and recombination proteins [BR:
efus03400
]
103297791 (LIG1)
Enzymes [BR:
efus01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103297791 (LIG1)
6.5.1.6 DNA ligase (ATP or NAD+)
103297791 (LIG1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
103297791 (LIG1)
DNA replication proteins [BR:
efus03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
103297791 (LIG1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
103297791 (LIG1)
DNA repair and recombination proteins [BR:
efus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
103297791 (LIG1)
NER (nucleotide excision repair)
Other NER factors
103297791 (LIG1)
MMR (mismatch excision repair)
Other MMR factors
103297791 (LIG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
DDR
PucR
Motif
Other DBs
NCBI-GeneID:
103297791
NCBI-ProteinID:
XP_027985417
LinkDB
All DBs
Position
21:complement(42337451..42371375)
Genome browser
AA seq
929 aa
AA seq
DB search
MQRSIMSFFHPKKEGKAKKPEETSSSIRETESPPKVALKERNRVVPESDSPVKRSGRKTA
RVLCSEGEEEDDEAITSPKGQKPAPNSPQVSPPGPVTSPESSPSLSSTSPAATISPSGIP
KRLTARKQLSKRKIQDVLEEHSMDKGQEAKRKKVEEEAETPTENLPKPEVAKEKKAEEGD
LPMMPPEPQNTCKAEPPTESDSEPMVVVKQEPQDEDQAKPPPRAPKMLSSFFTPRKPAIK
KEVKEEEPGTPRKEASKGLSHSDVSSSPLDPSSYNPAKKNYHPIQDACWTQGQKVPYLAV
ARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPILYLSLNCLGPPQQGLELGVGDG
VLLKAVAQATGRQLESVRAEAAETGDVGLVAENSRSTQRLMLPPPALTASGVIAKFRDIA
RLTGNASTARKMDIIKGLFVACRHSEARFITRALSGRLRLGLAEQSVLAALAQAVSLTPP
GQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCQVPDLDRIVPVLLEHGLEGLPEHC
KLSPGVPLKPMLAHPTRGVSEVLKRFDEAAFTCEYKYDGQRAQIHFLEGGEVKIFSRNQE
DNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQ
VQVCLYAFDLIYLNGESLIREPLSRRRQLLRENFVETEGEFVFATSLDTKDMDQIAEFLE
QSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRA
GRYGGFLLASYDEESEELQAICKLGTGFSDEELEEYHQTLQALVLPTPRSYVRADGAVAP
DHWLEPKTVWEVRCADLSLSPIYPAARGLVDSEKGISLRFPRFVRVREDKTPEEATTSAQ
VAWLYRKQSQIQNQEDTDQDSDLDLECFY
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagtatcatgtcatttttccaccccaagaaagagggcaaggcaaagaagcca
gaggagacatccagcagcatcagagagaccgagtcccctccgaaggtggcgctgaaggag
cggaatagagtggtgcctgagagtgactctccagtgaagaggtcggggaggaagacggcc
cgggtcctgtgcagcgaaggggaggaggaggatgatgaagccatcacgtcccccaaaggc
cagaagcctgcccccaactctccacaagtctcccctcccggtcctgtcacgtcccctgag
agcagcccttccctctccagcacctctccagcagcgaccatctccccgtccgggatcccg
aagcggctcacagctcgaaagcagctttctaaacggaagattcaggatgtcctagaggag
cacagcatggacaagggccaagaagccaagaggaagaaggtggaagaagaagcagagacc
ccaacagaaaacctcccaaagccagaagtggccaaagagaagaaagcagaagagggggac
ctgcccatgatgccccctgagccccaaaacacctgcaaagctgagccgccgacagaaagc
gattcagagcctatggtggtggtgaagcaggaaccccaggacgaggaccaggccaagcct
ccccccagagctcccaagatgctcagcagtttcttcaccccccggaagccggcaatcaaa
aaggaagtgaaagaagaggagcctggcaccccaagaaaggaggcgtccaagggactctcc
cactcggatgtgagctccagccccctggacccatccagctacaaccctgccaagaaaaac
taccatcccatccaggacgcatgctggacgcagggccagaaggtcccttatctggctgtg
gcccggacgtttgagaagatcgaggaggtttctgctcggctccggatggtggagacgctg
agcaacctgcttcgctccgtggtggccctgtcacctccagacctcctccccatcctctac
ctcagcctcaactgcctcgggccgccccagcagggcctggagctcggcgttggggatggt
gtccttctcaaggcggtggcccaggccacaggtcggcagctcgagtcggtgcgggctgag
gcagccgagacgggcgacgtggggctggtggccgagaacagccgcagcacccagagactc
atgctgcccccgcccgccctcaccgcctccggggtcatcgccaaattccgagacatcgcc
cggctcactggcaacgcttccacagccaggaagatggacatcatcaaaggcctctttgtg
gcctgccgccactcagaagcccgattcatcaccagagccctgagtggacggctgcgcctc
gggctggcagagcagtcggtgctggccgccctcgcccaggccgtgagcctcacgcctcca
ggccaagaattcccgccggccgtggtggatgctgggaagggcaagacagcagaggccaga
aagacgtggctggaggaacaaggcatgatcctgaagcagacgttctgccaggtgcccgac
ctggaccggatcgtccccgtgctgctggagcatggcctggaagggctcccggagcactgc
aagctgagtccaggggtccccctgaaaccaatgttggcccaccccacccggggcgtcagc
gaggtcctgaaacgcttcgatgaggccgctttcacctgcgagtacaaatacgacgggcag
agggcacagatccattttctggaaggcggggaggtgaagatcttcagcaggaatcaggaa
gacaataccggaaagtaccctgacatcatcagccgcatccccaagattaaactcccgtca
gtcacatctttcatcctggacacagaagccgtggcttgggaccgggagaagaagcagata
cagccattccaagtgctcaccacccgcaaacgcaaggaggtggatgcagcggagatccag
gtgcaggtgtgtttgtacgccttcgatctcatctacctcaatggagagtccctgattcgt
gagcccctttcccgacgccggcagctgctccgggagaacttcgtggagacggagggcgag
tttgtcttcgccacctccctggacaccaaggacatggaccagatcgcagagttcttggag
caatcggtgaaagactcctgcgaggggctgatggtgaaaaccctggatgtcgatgccacc
tacgagatcgccaagagatcgcacaactggctcaagctgaagaaggactacctggacggc
gtgggtgacaccctggacctcgtggtgatcggcgcctacctgggccgggggaagcgggcc
ggccgctacgggggcttcctgctggcctcctacgacgaggagagcgaggagctgcaggcc
atctgcaagcttggaactggcttcagcgacgaggagctggaggagtatcaccagaccctc
caggccctggtgctgcccacccctcgctcctacgtccgggcagacggcgccgtggccccg
gaccactggctggagcccaaaaccgtgtgggaggtcaggtgcgcagacctctccctctcg
cccatctaccccgctgcccgcggcctggtggacagtgagaaggggatctcccttcgcttc
cctcggtttgttcgtgtccgtgaagataagacgccggaggaggccaccaccagtgcccag
gtggcctggctgtacaggaagcagagtcagattcagaaccaggaggacacagaccaagac
tccgacctggacctggagtgtttctactag
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