Eptesicus fuscus (big brown bat): 103299829
Help
Entry
103299829 CDS
T09083
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus04120
Ubiquitin mediated proteolysis
efus04137
Mitophagy - animal
efus04141
Protein processing in endoplasmic reticulum
efus05012
Parkinson disease
efus05014
Amyotrophic lateral sclerosis
efus05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103299829 (PRKN)
04120 Ubiquitin mediated proteolysis
103299829 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103299829 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
103299829 (PRKN)
05014 Amyotrophic lateral sclerosis
103299829 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
103299829 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efus04131
]
103299829 (PRKN)
04121 Ubiquitin system [BR:
efus04121
]
103299829 (PRKN)
03029 Mitochondrial biogenesis [BR:
efus03029
]
103299829 (PRKN)
Enzymes [BR:
efus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
103299829 (PRKN)
Membrane trafficking [BR:
efus04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
103299829 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
103299829 (PRKN)
Xenophagy
Other xenophagy associated proteins
103299829 (PRKN)
Ubiquitin system [BR:
efus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
103299829 (PRKN)
Mitochondrial biogenesis [BR:
efus03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
103299829 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR
Rad60-SLD
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
103299829
NCBI-ProteinID:
XP_027988722
LinkDB
All DBs
Position
10:complement(95163642..95697767)
Genome browser
AA seq
608 aa
AA seq
DB search
MFGSSQVKGVEGRGGAGRAQDLGRCCNELPKVSLLLLSDASTLRSVAPPPVTYVSWDLTR
KCGRPRAAGGVRRNCALELRLPEGRGLLPVCACVLRRPGAGAGSPGGLKPGALRLREARA
GARARRGPLLPSSAHLPVTMIGTWCLSVFVRFNSSHGFPVEVDAATSIFQLKEEVAKRQG
VPADQLRVIFAGKELRNDLVVQSCDLGQQSIVHVVLRPGREGPTMATGGDHPQGTAGAFV
REPESLTRVDFSSSVLPTDSAGLAVILHDDREGAAQTAGRPGRPAYNSFFVYCKGPCQRV
QPGKLRVRCGTCQQATLTLAQGPSCWDDVLIPKRMRGECQSPGCPGTSAEFFFKCSAHPT
SDKETSVALNLITTNSRDIPCITCTDIRSPVLVFQCNHRHVICLDCFHLYCVTRLNDRQF
VHDPQLGYSLPCVAGCPDSLIKELHHFRILGEEQYGRYQHYGAEECVLRMGGVLCPRPGC
GAGLLPEPGQRRVTCEGGGGLGCGLVFCRDCKGAFHEGACSALAAASGAAAQAFQVDARA
AEQARWEESSRETIQKTTKPCPRCRVPVEKNGGCMHMQCPQPQCQLEWCWNCSCEWSRAC
MGAHWFDV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcagctcccaggtgaagggagttgaggggaggggaggggcgggaagagcgcag
gaccttggccggtgctgcaacgagcttccaaaggttagcctcctgttgctaagcgacgcg
tcaacactgcggtcggtggctccacccccagtgacgtacgtttcctgggacttaacccgg
aagtgcggccgaccgcgggcggcgggcggcgtgaggagaaactgtgcgctcgaactacga
ctcccagaaggccgtgggctgctcccggtctgcgcgtgcgtcctccgacggccgggcgcc
ggggcggggagtccgggcggactgaagcccggagcgctccgcctgagggaggcgcgggcg
ggcgcccgagcgcgcagaggccccctcttgcccagcagtgcgcacctgcccgtgaccatg
atcggtacgtggtgcctgtcagtgttcgtgaggttcaactccagccacggattcccagtg
gaggtggacgctgccaccagcatcttccagctcaaggaggaggttgctaagcgacagggg
gttccagccgaccagctgcgcgtgattttcgcggggaaggagctcaggaatgacctggtg
gtgcagagctgcgacctgggccagcagagcatcgtccacgtcgtgctgagacccgggaga
gaaggccccacgatggccaccggcggggaccatccccagggcactgcaggggccttcgtg
agggagcccgagagcttgacccgcgtggacttcagcagctccgtgctccccaccgactcc
gcgggcctggccgtcattctgcacgacgacagagagggcgctgcgcagacagcgggcaga
ccaggtagaccggcctacaacagcttcttcgtctactgcaagggcccctgccagcgggtg
cagcccgggaagctccgggtgcggtgcggcacctgccagcaagccacgctcaccttggcc
cagggcccgtcctgctgggacgacgtgctgatcccgaagcggatgaggggtgagtgccag
tcgccaggctgccccgggaccagcgcggaatttttctttaaatgttcggcgcacccgacc
tctgacaaagaaacatcagtagctttgaacctgatcaccacaaacagccgggacatcccc
tgcatcacgtgcaccgacatcaggagccccgtcctggttttccagtgcaaccaccgccac
gtgatctgcttggactgcttccacctgtactgcgtgaccagactcaacgaccggcagttt
gtccacgacccccagctgggctactcgctgccgtgtgtggccggctgccccgactccttg
attaaagagctccatcacttcaggatcctcggggaagagcagtacggccgctaccagcac
tacggcgccgaggagtgcgtgctgcgcatgggcggcgtgctgtgcccgcgccccggctgc
ggcgccgggctgctccccgagcccgggcagaggagggtcacctgcgagggcggcggcggc
ctgggctgcgggctcgtcttctgccgcgactgtaagggcgccttccacgagggggcgtgc
agcgccctggccgccgcctcaggggcagccgctcaggccttccaggtggacgcgcgggcg
gccgagcaggcccgctgggaggagtcctcccgggagacgatccagaagaccaccaagccc
tgcccgcgctgccgcgtgcccgtggagaagaacggcggatgcatgcacatgcagtgcccg
cagccccagtgccagctggagtggtgctggaactgcagctgcgagtggagccgcgcctgc
atgggcgcccactggttcgacgtgtag
DBGET
integrated database retrieval system
