Duffyella gerundensis: EM595_2556
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Entry
EM595_2556 CDS
T04258
Symbol
fadJ
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
ege
Duffyella gerundensis
Pathway
ege00071
Fatty acid degradation
ege00280
Valine, leucine and isoleucine degradation
ege00310
Lysine degradation
ege00362
Benzoate degradation
ege00380
Tryptophan metabolism
ege00410
beta-Alanine metabolism
ege00640
Propanoate metabolism
ege00650
Butanoate metabolism
ege00907
Pinene, camphor and geraniol degradation
ege00930
Caprolactam degradation
ege01100
Metabolic pathways
ege01110
Biosynthesis of secondary metabolites
ege01120
Microbial metabolism in diverse environments
ege01200
Carbon metabolism
ege01212
Fatty acid metabolism
Module
ege_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EM595_2556 (fadJ)
00650 Butanoate metabolism
EM595_2556 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
EM595_2556 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EM595_2556 (fadJ)
00310 Lysine degradation
EM595_2556 (fadJ)
00380 Tryptophan metabolism
EM595_2556 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EM595_2556 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EM595_2556 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EM595_2556 (fadJ)
00930 Caprolactam degradation
EM595_2556 (fadJ)
Enzymes [BR:
ege01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EM595_2556 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EM595_2556 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EM595_2556 (fadJ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
CUU24787
UniProt:
A0A0U5L7W8
LinkDB
All DBs
Position
1:complement(2728295..2730436)
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AA seq
713 aa
AA seq
DB search
MNRSAFHLTLRSDHVAVITIDVPDEKVNTLKAEFAAQLRQIISEARANPRLAGLVFISGK
KDSFIAGADISMIDRCQSAQQAQALAEQGQQVMAEIAHLPFPTVAAIHGACLGGGLELAL
ACDRRICTLDDKTRLGLPEVQLGLLPGSGGTQRLPALIGVTQALPLILTGKTLRARQALK
CGLVDDAVAVSILLETAVKSALQGKKKRRPLPWRERLAQSAIARPLLFSVVRKQTQRKTH
GNYPAAERILAVVRRGLGQSNGYAAEAQAFGELAMTPQSVALRSLFFATTEMKKEQDAEP
RTIARVGVLGGGLMGGGIASVTAMRAGLPVRIKDINNQGINHAMQYSWDLLSKKVQRRQM
KPAERQQKMSMISGGTDYQGFAHRDIVLEAVFEDLALKQQMVAEVEQQCGEMTIFASNTS
SLPIVDIAAGAQRPENIIGLHYFSPVDKMPLVEVIPHAATSPETVATTVALARKQGKTPI
VVADKAGFYVNRILAPYINEALHCLLAGEPIEHIDKSLVQFGFPVGPLQLLDEVGIDVGS
KIVPVLTEAFGERFAAPPAFAAVLNDGRKGRKNSRGFYRYDAPRWRGRQPDTSLYSLLKV
QPKTQLADGAVAQRCVAMMLNEAVRCLDEGVIRSARDGDIGAIFGIGFPPFTGGPFRYID
SFGAENLRQLLHSLMQLHGDRFAPCAALNRLAEQGERYYPLPDVANKQPNSAA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgttcagcgtttcatctcactctacggtcggatcatgtcgcggtgattactatt
gatgtacctgatgaaaaggtgaataccctgaaggcggagtttgctgcgcagctgcggcag
atcatcagcgaggcgcgggcaaacccgcggctggctggtctggtgtttatctcgggtaaa
aaggattcatttattgccggtgctgatatcagcatgatcgatcgctgccagagcgcgcaa
caggcgcaggcgctggcggagcagggacagcaggtgatggcggagattgcccatctgccg
tttcctaccgtggcggcgattcacggcgcctgcctcggcggcggcctggaactggcgctg
gcctgcgatcgccgcatctgcacgctggatgacaaaacccggctcggcctgccggaagtg
cagctgggtttgctgccgggctccggcggcacgcagcggcttccggcgctgattggggtg
acacaggcgctgcccctgatactcaccggtaaaaccctgcgcgcccgccaggcgttgaaa
tgtgggctggtggatgatgccgttgccgtctctattttgctggagaccgcggtgaaaagc
gcactgcagggcaagaaaaagcgtcggcctctgccatggcgcgaacggctggcgcagagt
gcgatcgcgcgtccgctgttgttctctgtggtgcgcaagcagacccagcgaaaaacccac
ggcaactatccggcggcggaacggattctggcggtggttcggcgcggattaggccaaagc
aatggctatgctgcggaagcgcaggcctttggggaactggcgatgacgccgcagtctgtc
gcactgcgcagcctgttttttgctaccaccgaaatgaaaaaagagcaggacgcggagccg
cgcaccatcgcgcgcgtcggcgtactgggtggcggcctgatgggcggcggcatcgccagc
gtgaccgcgatgcgcgccgggctgccggtacgcattaaagatatcaacaatcagggcatc
aaccatgccatgcagtacagctgggatctgctgagcaagaaagtgcagcgtcggcagatg
aagccagcggaacgccagcagaaaatgtcgatgatctccggcggcaccgattatcaaggc
tttgcccatcgcgatattgtgctggaagcggtgtttgaggatctggcactgaagcagcag
atggtggcggaagtagaacagcagtgcggcgagatgaccatttttgcctctaatacctca
tcgctgccgattgtggatatcgccgctggcgcgcagcggcctgagaacatcatcgggctg
cactatttcagtccggtggacaaaatgccgctggtggaggtcattccgcatgcggcgaca
tcgcctgaaaccgtcgcaaccacggtggcgcttgcaagaaagcagggcaaaacgccaatc
gtcgtggcggataaagccgggttttacgttaaccgcattctggcaccctacattaatgaa
gcgctgcattgcctgctggcgggcgagccgattgagcacatcgataaatcgctggtgcag
ttcggctttccggtggggccattgcagctgctggatgaggtcggcattgatgtcggcagt
aaaattgtgccggtgttaaccgaagcgtttggtgagcgttttgccgcaccgccagcgttt
gctgcggtgctcaacgatggccgcaaaggtcgcaagaatagccgcggcttttatcgctac
gatgcgccacgctggcgtgggcgtcagcctgataccagcctctattctctgcttaaagtg
cagccgaaaacccagctggccgacggtgcggttgcccagcgctgcgtggcgatgatgctg
aatgaagcggtgcgctgtctggatgaaggggtgattcgtagcgcacgcgacggcgatatc
ggcgccatattcggcatcggctttccgccgtttaccggtgggccattccgttatatcgac
agttttggcgctgaaaacctgcggcagctgctgcatagcctgatgcagctgcatggcgat
cgtttcgcaccctgtgcggcgctgaaccgattggctgagcagggtgaacgctattatccg
ctgccggatgtggcgaataaacaacccaattcagcggcttag
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