Sinorhizobium garamanticum: PZN02_004258
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Entry
PZN02_004258 CDS
T09001
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi00521
Streptomycin biosynthesis
egi00523
Polyketide sugar unit biosynthesis
egi00541
O-Antigen nucleotide sugar biosynthesis
egi01100
Metabolic pathways
egi01110
Biosynthesis of secondary metabolites
egi01250
Biosynthesis of nucleotide sugars
Module
egi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PZN02_004258 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PZN02_004258 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PZN02_004258 (rfbC)
Enzymes [BR:
egi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PZN02_004258 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
NADH_oxidored
Motif
Other DBs
NCBI-ProteinID:
WEX90699
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All DBs
Position
2:complement(282043..282606)
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AA seq
187 aa
AA seq
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MAEIKRLALDGVLEIVPRKFSDERGFFSETYNAETLLAHGIPLAFVQDNHSYSAMTGTLR
GLHYQLPPQAQAKLVRVVRGRAFDVVVDIRKGSPTFAQWVAVELSAERWNQILVPVGFAH
GLITLEPETEVLYKVSEHYSAEHERAIRFDDPQIGIRWPVAPDRLRLSAKDRDAPLLADA
DLFDFGR
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatcaagcgcctcgccctcgacggcgtcctggaaatcgtaccgcgcaagttc
agcgacgagcgggggtttttctcggagacctacaatgccgagacgttgctggcgcatggc
atcccgctggccttcgtgcaggacaaccactcctattccgcaatgacgggcacgttgcgc
ggtctgcactaccagcttccgccgcaggcccaagccaagctcgtgcgggtcgttcggggg
agggcgttcgacgtggtcgtcgatatccgcaagggatcgccgacgttcgcgcagtgggtc
gcggtcgaactctcggccgaaagatggaaccagatcctggtgcccgtggggttcgctcac
ggcctgatcacactcgaaccggagacggaggtcctttacaaggtgagcgagcactattcc
gcagagcacgaacgcgcgatccgcttcgacgatccgcaaatcgggataaggtggcccgtg
gcccctgatcgtttgcgactatccgcgaaggatcgggacgcaccgctgctggccgatgcc
gacctcttcgattttggccggtga
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