Echinococcus granulosus (hydatid tapeworm): EGR_01622
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Entry
EGR_01622 CDS
T05553
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGR_01622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egl03019
]
EGR_01622
Messenger RNA biogenesis [BR:
egl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EGR_01622
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EGR_01622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
36337337
NCBI-ProteinID:
XP_024354736
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MADKRKLQCDIDRTLKRVQEGRVAFQEILDKFEGSNNQTQKEKFEADLKKEIKRLQRFRD
QIKTWHTCNDIKDKRPLLEARKLIEMDMERFKVIEKETKTKAYSKEGLLSADAKKDPLQK
EKEELDEWLKQSISALQTKSERYEYDLETLSTTGKKKRVDKEKAALLEEKKQKLEFCAYH
IEKLETVMRHLDNERLDCSKVRSLKDPIEYVIESIDDVSMEDYRSLYEDMHLEDIGDGSV
VTPNALVAPGFLDYDLNSPVALSTATKAGNDDDPTLFSSSLPPGSSTSSNASSRERPKTS
LEEKCIFNPTSLSSTSTPVKEKKEKSAKSQPASASVNQTLPSSFHLPGSSTATPSSNKKS
FAGAAAKHQQPEAIKPEFDRLTVPIPDSAPIHRENYAKVAGDLKKDKSKKELHQQYEFDP
KTVISSSSATPTKNEKRKVEEAKERAQSSDSAVSIIKLPSPTHTPSVAVDVVSVSVAPPL
TSVSLNSVTSKSSASTSQALTTANVAPAMSKLQQEQRPSPAPFVLVHPRDALAPFRNQHL
DKQRTLPPELRAQLQALEIAFRRSPLPTDIFKSRMLVTKRPINVPSFFPLEPFKGHDLEE
YYMKMDAQTLFFIFYYFEGTRAQYFAAKALKRMSWRFHTKYMYWFQRNEEPKQITEEFES
GAYVFYDFETMSQRKKDEFVFLYSFLEDNDL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagataagaggaaactacaatgtgatattgacagaaccctaaagcgagtgcaggaa
ggtcgtgtcgcctttcaggaaatccttgataaatttgaaggttctaataatcaaacccag
aaggagaagttcgaggctgacttgaagaaggaaattaaaagacttcagcgattccgggat
caaatcaagacttggcacacatgtaacgacataaaggataagcgaccactgttggaagcc
cgaaaattaatcgaaatggatatggaaaggttcaaagtcatcgaaaaggaaacgaaaact
aaagcttattcgaaagaagggctcctttctgctgatgctaaaaaagacccattgcaaaaa
gaaaaagaagagcttgatgagtggctaaagcaatcaatttctgctttgcaaactaagtca
gaaaggtacgagtatgacctagaaacgttatccactacgggtaaaaagaaacgtgttgat
aaggagaaagcagcccttttggaggagaaaaagcaaaagctggagttttgtgcgtatcac
atcgaaaagcttgaaacggtcatgcggcatttagacaacgaacgtcttgattgttcaaaa
gttcggtcgctaaaggatcctattgaatatgtcattgaatcaatcgatgatgttagcatg
gaggattatcggtccttgtacgaggatatgcatttggaagatataggagatggttcggtc
gtgacgccaaatgctttggttgcaccgggatttctcgattacgatttaaattctccagtc
gctctttcgaccgccacaaaagctggaaatgacgacgatccaacactatttagctcttct
ctgcctcctggttcttctacttcctcgaacgcctcctcccgcgagcggccgaagacctct
ttagaggagaagtgcatattcaaccctacttccctgtcctctactagcactccggtaaag
gagaagaaggaaaagagtgctaaatcacagcctgcttctgcatccgttaaccaaacgctc
ccttcttccttccacttgcctgggtcttccactgccacaccttcatcgaataagaaatct
tttgcaggtgctgctgccaagcaccagcaacctgaagccataaaaccggaatttgatcga
ctaacagttcccattcccgattctgctccgattcatcgtgaaaactacgcgaaagtggct
ggagatttaaaaaaggataagtctaagaaggaactacaccagcaatatgaatttgatccc
aaaactgtcatctcctcttcgtctgcgactcctactaaaaatgaaaaacggaaggtcgaa
gaagccaaggagagggcccaaagtagcgattctgctgtttcgataatcaagcttccatct
cccactcatacaccatctgttgctgtggatgtggtgtctgtttccgttgcaccgcctttg
acttcagtctcacttaattcggtcacttctaagtcctccgcatctacctctcaagctttg
actactgctaatgttgccccagctatgagtaaactgcagcaggagcagcgaccttcccct
gctcctttcgttctcgtccatccccgtgatgctttagcaccttttcgtaatcaacatctg
gataagcagcgtacgcttcccccagagcttcgagctcagttgcaagcgctagagattgcc
ttccgacgttcgcctctgcccaccgacatttttaaatcgcgtatgctcgtcacgaagcgg
ccaataaatgtgcccagcttttttccgctggagccattcaaggggcacgacctggaagag
tactacatgaagatggacgcacagacactcttcttcattttctactatttcgagggcaca
agagcccaatactttgcggcaaaggcgctcaagcgcatgtcatggcgctttcacaccaaa
tatatgtactggttccagcgtaacgaagagcctaaacaaatcaccgaagagtttgaatcg
ggtgcctacgtattctacgatttcgaaaccatgagccagcggaagaaggacgagtttgtt
ttcctctatagctttcttgaggacaatgatttatag
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