KEGG   Echinococcus granulosus (hydatid tapeworm): EGR_07393
Entry
EGR_07393         CDS       T05553                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
egl  Echinococcus granulosus (hydatid tapeworm)
Pathway
egl03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:egl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    EGR_07393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:egl03400]
    EGR_07393
Enzymes [BR:egl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     EGR_07393
DNA repair and recombination proteins [BR:egl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     EGR_07393
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 36343108
NCBI-ProteinID: XP_024348929
LinkDB
Position
Unknown
AA seq 749 aa
MASEVVDVTFEDFVELIGALAGCSGRKVRTSMISRFIRDGPNGTTAHFLIDFIDLGSLHK
DTALVLKLLLPKSSPRIFNVQDKQLIKYCSDIFDTDKEAMLKDLEKGDVGMTLFTFFKKS
AAVQPLKKSKVSLKQVDQWLDELSNASGDNDRTTILSKCTKSCTAEDFLVFIRLIKKDLR
IDVGSKQVLDALGPQAYSAFQASQNLEAVVEKARVSLDNGKRRLRRQDLSVSIKLMTPVK
PMLAEPGRSADAIISKISTLGGALVEIKYDGERVQVHKQGDRFVYYSRSLKPVHSSKVDH
LKEYIPKAFPTAADLILDSEILLLDTNTQKPLPFGTLGVHKRKGFEDATVCLFVFDCLYI
NGRSLLLEPMYKRREILEQNMTVVPNRVLFSEKHEVKTKRDLNELLAHVFAEGLEGLVVK
PKNSVYEPGKRHWIKIKKDYLGQGTMADSADLIVLGAYYGKGRKGGLMSVYLMGSYDPTT
EKFCTVTKVGSGFKDDTLLRLQKQGQMIKISKDYSKVPKWLNVSRCLVPDFVVKDPKKSP
VWEITGAEFSRAGSHTAGASATQEGISIRFPRITRQRPDKTWREATDVPRLEALLAASHT
QPDWSRWLDIISRPSNQMASKDVLKWTLEGEDEDLKMKECAKKPCLKRIRDSYQFNYLRP
LLEGFVIEVPKTLIDDASFYPLYRRMVACGAVVVGDGLRHSMMTATHAIVWPDETRSSPP
SGNLIPLTVEWLDKSINENVLQPLPVKCL
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggcatcagaagtggtggatgtaacttttgaggacttcgttgagttgatcggtgctttg
gcgggctgcagtggacgcaaggtacgcacttcaatgatttcgaggtttattagagatgga
ccgaatggtactactgcacattttcttattgattttattgacctaggctcgttgcacaag
gacacggctctggttttgaagttacttttgccgaaatcttcccccagaatatttaatgtt
caagataagcagttaatcaagtattgctccgacatatttgatactgacaaagaagctatg
ctgaaggatttggaaaagggagacgttggcatgactctttttacttttttcaaaaaaagt
gcggcagttcaaccattgaaaaaaagtaaggtttctttaaaacaggttgatcagtggtta
gacgaactgtcaaacgccagtggagacaatgatcggacgactattctgtcgaagtgcaca
aagtcatgcaccgccgaagactttcttgtattcattcgtcttatcaaaaaggatctacgc
attgatgttggttctaaacaagttctagacgcactgggacctcaagcctactccgcattt
caagcttcgcagaaccttgaagccgttgtagagaaggcacgagtctcgttagacaacggg
aaacgacgacttagacgtcaggatttatcggtgtcgatcaaactcatgacgccggtaaaa
ccgatgcttgctgaaccgggtcgttcagcggacgcaattatctcgaagatttccacgtta
ggtggtgcactggtagagatcaagtacgatggtgagcgagtacaggtgcataaacagggg
gaccgatttgtctactactcacggagtcttaaacctgttcattcgagcaaggtggaccac
ctcaaggagtacatccccaaggcattcccaactgctgccgatttgattttggactccgaa
attcttcttctcgacacgaacacccaaaaaccactgccttttggcactctcggtgttcat
aagaggaaagggtttgaagatgccacagtgtgcctcttcgtcttcgattgtctctacatc
aacgggagaagtctccttctcgaacctatgtacaaacgacgtgagattctggaacagaac
atgactgtcgtgccaaacagggtgctgttttctgaaaaacacgaggtcaagacaaaacgc
gacttaaacgaactattggctcatgtatttgctgaaggcttggaaggtcttgtcgttaaa
ccgaagaatagtgtctatgagccgggaaaacgtcactggataaagattaagaaggactac
ctcggtcagggaaccatggccgattcagctgacctcatagtcttgggcgcttactatgga
aaaggaagaaaggggggactgatgtctgtctacctaatggggtcatacgacccgacaacg
gagaaattttgcaccgtcacgaaagttggaagcggtttcaaagatgacactcttttgcgt
ctacaaaaacaaggtcaaatgattaagatctcgaaggactactctaaggtgcccaagtgg
ttgaacgtttctcgctgtttggtcccagattttgttgtaaaggatccaaagaaatcacct
gtgtgggagattaccggcgccgagttttcgcgcgccggatcgcacaccgcaggagctagc
gccacacaggaaggcatctctatacgctttccacgaatcactcgtcaacgccccgacaag
acgtggcgtgaggcgacggatgtgccacgactggaggcccttctcgccgcatcgcacact
cagcctgattggagtcgatggctagatatcatctcaaggccttccaaccaaatggcttcg
aaagatgtactgaaatggactctagagggggaagatgaggatctgaagatgaaggaatgc
gcaaagaagccctgtcttaaacggattcgggattcttaccaattcaattacctccgacca
ctgcttgaaggttttgtaattgaagtacccaagaccctgattgacgatgcctccttctac
ccactctaccgccgcatggttgcttgtggcgctgtcgtcgttggagatggccttcggcat
tccatgatgactgcgactcacgccattgtttggcctgatgagacgcgatcatcaccacct
tcgggtaacttgatcccgttgacagttgaatggttggataagtcgataaatgagaacgtg
ctgcaaccgctgcctgtgaagtgcctttaa

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