Aurantiacibacter gangjinensis: BMF35_a1330
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Entry
BMF35_a1330 CDS
T04581
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
egn
Aurantiacibacter gangjinensis
Pathway
egn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BMF35_a1330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egn03400
]
BMF35_a1330
DNA repair and recombination proteins [BR:
egn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMF35_a1330
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BMF35_a1330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
SWI2_SNF2
AAA_16
DUF87
AAA_33
Kinesin
SRP54
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
APE28159
UniProt:
A0A1J0V7Z6
LinkDB
All DBs
Position
I:complement(1380416..1382611)
Genome browser
AA seq
731 aa
AA seq
DB search
MPGMAELVIRRGLEEPDTTGEFTPHKPARPEKSQGGRPFKLVSDYEPAGDQPTAIEELVR
EAEGGEKTQVLLGVTGSGKTFTMAKVVEQLQRPALVLAPNKILAAQLYGEFKSFFPENAV
EYFVSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVLIVASVSCLY
GIGSVETYSAMIFDIKKGETVDQRELIRKLVALQYKRNDTAFARGNFRVRGDNLELFPSH
LEDTAWRISFFGDEIEEIAEFDPLTGKKGQALDKVRVYANSHYVTPGPTMKQAAEAIKFE
LEERLKELHEEGRLLEAQRLEQRTNFDLEMIAATGSCNGIENYSRFLTGRLPGEPPPTLF
EYLPENALLFVDESHQTIPQIGAMARGDHRRKLTLAEYGFRLPSCIDNRPLRFNEWDAMR
PQTFAVSATPGGWEMEQTGGVFAEQVIRPTGLIDPPVEIKPVEDQVQDCIAEAKATAANG
YRTLVTTLTKRMAEDLTEFMHEQGVRVRYMHSDVETLERIELIRDLRLGVYDVLIGINLL
REGLDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRVTGSMERAMA
ETERRREKQRAFNEKHGITPTTIKRDIADIVAHSAAADGVTVGTGDNEVNNLVGHNLRAY
IEDLEKRMRAAAADLEFEEAGRLRDEIRRLEKDELGLPDEAKKAPVVGRSNEGRPGTRKL
RYGRTQRKFGK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcatggcagaattggtaatcaggcgcgggctggaagagccggatacgaccggc
gagttcaccccgcacaaacccgcgcgcccggaaaagtcgcaaggcggcaggccgttcaag
ctggtttccgattacgaaccggcgggcgaccagccgactgccatcgaagagctggtgcgc
gaggccgagggcggcgagaaaacgcaggtgctgctgggcgttaccggcagcggcaagacc
ttcaccatggccaaggtggtggaacagttgcagcgccctgccttggtgctggcgccgaac
aagatcctcgccgcgcagctatatggcgagttcaagagcttcttccccgagaacgccgtc
gaatatttcgtcagctactacgactactaccagcccgaagcctatgtgccgcgctccgac
acctatatcgagaaggagtcgagcgtaaacgaggccatcgaccggatgcgccactccgcc
acgcgcgccctgctggaacgcgacgatgtgctgatcgtggcgtcggtgtcctgcctctac
ggcatcggttcggtcgaaacctattcggccatgatcttcgatatcaagaaaggcgagacg
gtcgaccagcgcgagctgatccgcaagcttgtcgcgctgcagtacaagcgaaacgacaca
gcctttgcccggggcaatttccgcgtgcgcggcgacaatctggagctgtttcccagtcac
ctcgaagacaccgcatggcgcatcagctttttcggcgacgagattgaggagattgccgag
ttcgacccgctgaccggcaagaaggggcaggcgctcgacaaggtgcgcgtctatgccaat
tcgcactacgtcacccccggcccgacgatgaaacaggcggccgaagccatcaagttcgag
ctggaagagcggctgaaggaactgcacgaggaaggccgcctgctcgaagcgcagcggctg
gagcagcgcaccaatttcgacctcgagatgattgccgccaccggcagctgcaatggtatc
gagaactactcgcgcttcctcacaggccgcctgcccggcgaaccgccgcccaccctgttc
gaatacctgcccgaaaatgccctgctgttcgtcgatgagagccaccagaccatcccgcag
atcggcgcgatggcgcgcggcgaccatcggcgcaagctgacgctggcggaatacggcttc
cgcctgcccagctgtatcgacaaccgcccccttcgcttcaacgaatgggacgccatgcgc
ccgcaaacctttgccgtctccgccacgcctggcggctgggagatggagcagacgggcggc
gtgttcgcagagcaagtcatccgccccaccggcctcatcgatccgccggtcgagatcaag
ccggtggaagaccaggtgcaggattgcattgcagaggccaaggccactgcggccaatggc
tatcgcacgctggtgacgacgctcaccaagcgcatggccgaggaccttaccgaattcatg
cacgaacagggcgtgcgcgtgcgctacatgcattccgatgtcgagacgctggagcgtatc
gagctgatccgcgacctgcgcctgggcgtctatgacgtgctgatcggcatcaacctgctg
cgcgaagggctcgacattcccgaatgcgggctcgtcgccattctcgatgccgacaaggaa
ggcttcctgcgctcagagacatcgctcatccagacaatcgggcgcgcggcgcgcaacgtg
gatgggcgcgttatcctctatgccgaccgggtcaccggcagcatggaacgcgccatggcg
gaaaccgaacgccgccgcgagaagcagcgcgcgttcaacgaaaagcacggcatcaccccc
accacgatcaagcgcgacattgccgatatagtcgcccattcggctgccgccgatggcgtg
accgtgggcaccggtgataacgaggtgaacaatctcgtcggccacaatctgcgcgcatat
atcgaagacctcgaaaaacgcatgcgcgccgctgccgcagacctcgaattcgaggaagcc
ggccgcctgcgcgacgaaatccgccgcctggagaaggacgagctgggcctgccggacgag
gccaagaaagcgccggtcgtgggccgcagcaatgaaggccgccccggcacgcgcaagctg
cgatacggccgaacgcagcggaaattcgggaagtag
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