Eucalyptus grandis (rose gum): 104433937
Help
Entry
104433937 CDS
T03547
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104433937
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
egr01002
]
104433937
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
104433937
Enzymes [BR:
egr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104433937
Peptidases and inhibitors [BR:
egr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104433937
Ubiquitin system [BR:
egr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104433937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
DGCcoil
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
104433937
NCBI-ProteinID:
XP_010045158
LinkDB
All DBs
Position
2:complement(55721489..55736030)
Genome browser
AA seq
1118 aa
AA seq
DB search
MTVMTPAPIDQQEDEEMLVPHSDLAENNHQPMEVAAPAEAPNPADNQPVDDPPPSRFTWR
IDNFSRLNTKKLYSEIFVVGGYKWRVLVFPKGNNVEYLSMYLDVADSASLPYGWSRYAQF
SLGVLNQIHNKYTVRKDTQHQFNARESDWGFTSFMPLSELYDPARGYLMHDTLIVEAEVI
VRRVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSA
SIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
VKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICDVDEKDIAE
HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLAEQIGKDIYFDLVDHDKVKSFRI
QKQMPFNIFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTPAEEMQSVGQLREVSN
KVPNAELKLFLEVELGLDMHPIAPPDKSKEDILLFFKLYDPEKGELRYVGRLFVKGTGKP
AEILTKLNEMAGYSPDQEIELYEEIKFEPNVMCEPVDKKVTFRASQLEDGDILCFQKSFP
TENGEQFSYPDVPSFLEYVHNRQIVHFRSLEKPKEDDFSLEMSKLYTYDDVVERVAQQLG
LDDPSKIRLTSHNCYSQQPKPHPIKYRGVDHLSDMLVHYNQSSDILYYEVLDIPLPELQG
LKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLSDLKTKVELSDPNAELRLLEVFYHKIY
KIFPLNEKIENINDQYWTLRAEEIPEEEKNLGQTDRLIHVYHFTKDTAQNQVQVQNFGEP
FFLVIHEGETLAEIKVRVQKKLQVPDEEFAKWRFAFLSLGRPEYLQDHDIVSNRFQRRDV
YGAWEQYLGLEHSDTAPKRAYAANQNRHTFEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcatgactcctgcccccatcgatcaacaggaggatgaggagatgctcgttccc
cactcggatttggccgagaacaatcaccagcccatggaagtggcagcgcccgctgaagcc
cctaacccagcagacaatcagccagtggatgatcctccaccatcaagattcacatggcga
attgacaacttctctaggctgaacaccaagaagctttactctgaaatattcgtagttggt
ggttataaatggcgggtacttgttttcccaaaaggaaataacgtggagtacttgtctatg
tatttggatgtggctgattcggcaagcttgccatatggatggagtagatatgcgcagttc
agtttaggggttttaaatcaaatacataacaaatatactgtcagaaaagatacgcaacac
cagttcaatgcccgggaaagtgattggggtttcacatcctttatgcctcttagtgaactt
tatgatcctgctagaggttatctaatgcatgatactcttatagtggaagctgaggttatt
gttcgtagagttgtagattactggacatatgactccaaaaaagagactggttatgttggt
ctcaagaaccaaggagcgacatgttatatgaactctctcctccagacactataccatatt
ccttacttcaggaaggctgtgtaccatatgcctactactgagaatgacatgccatctgca
agcatccctctggctctccagagtttattttataagctccagtacagcgacagcagtgta
gcgacgaaagagttgaccaagtcatttggatgggacacgtacgattctttcatgcagcat
gatgtgcaagaactaaatagggttctatgcgaaaagcttgaagacaaaatgaagggtact
gtcgtcgaggggactatacagaaattatttgaaggacatcatatgaattatattgaatgc
attaatgtggactacaaatctacgagaaaggagtcattttatgaccttcagcttgatgtc
aagggctgtcgagatgtttacgcttcttttgataagtatgtcgaagttgaacgcctcgag
ggtgataataagtaccatgctgagcaatatggcttgcaggatgcaaaaaagggggttctg
ttcattgacttcccccccgttcttcaactccaattgaaacgatttgaatatgattttatg
cgggacactatggtgaagatcaatgatcgctatgagtttcctctgcaacttgatcttgac
cgcgaggatggtaaatatttgtctcctgatgctgataggagcgtccgcaatctctacaca
ctccacagtgttctggttcacagcggtggggtgcatggtggacattattatgcatttatc
agacctactctttctgaccaatggtataaattcgatgatgagagagtaacaaaagaagat
gtaaagagagcactagaggagcaatatggtggagaggaagagctgccgccaacaaatcct
ggatttaacaacactccatttaagtttactaaatactcaaatgcatacatgctggtgtat
atacgtgagagtgacaaggacaagatcatctgtgatgtggatgagaaggacattgccgaa
catctgagggagagattgaaaaaagaacaagaagaaaaggaacataagaagaaagagaag
gccgaggcacacttgtacacaatcattaaggttgcacgggatgaagaccttgctgaacag
attggcaaggatatttattttgatctggtggatcatgacaaagttaaaagtttccgcatt
caaaagcagatgccttttaacatcttcaaggaggaggttgctaaagaatttggcgttccg
gtgcaatttcagcggttctggctatgggcaaaacgccagaaccacacttatcgtcctaat
cggccattgactccggcagaggaaatgcaatctgtaggacagttgagagaagtgtcaaat
aaagttccgaatgccgaattgaagttgttcttggaagtagaactcgggctggatatgcac
cccattgccccacctgacaagtcaaaggaagatatattattgttctttaagctttatgat
cccgagaagggagagctgcgatatgttggaaggcttttcgtgaagggtactggtaaacct
gcagaaatcttgaccaagttaaatgaaatggccggctattctcctgaccaagaaatcgag
ctttacgaggaaataaagttcgagcctaatgtcatgtgtgaacctgttgacaagaaagtg
acatttcgagctagccagcttgaagatggagatatcctgtgcttccagaaatcttttcca
actgaaaatggtgaacaattttcctatccagatgtcccttcctttctggagtatgtgcac
aatcgtcaaattgtccacttccgttctcttgaaaaacctaaggaggatgatttctctttg
gagatgtctaagctgtatacctatgatgatgttgtggaaagagttgctcagcagcttggt
ttggatgatccatcaaagatcaggctcacatctcacaactgttactctcagcaacccaag
ccccatcctataaagtatcgtggagtggatcatttgtctgatatgttggttcactataac
cagagttcggatatattgtactatgaagtgctagatatacctcttccagaactgcaaggt
ttaaaaactttaaaagtagcatttcatcatgctactaaggatgaagtggtcatccatacg
atcagacttccaaagcagagtaccgttggggatgtgcttagtgatctcaagacaaaggtt
gagttatccgatcctaatgcagaacttaggttgcttgaagttttctaccacaagatctac
aagatctttcccctcaacgagaaaattgagaacataaatgatcagtattggacattgcgt
gcagaagagattccggaagaagagaaaaatcttggtcaaactgatcgtctaatccatgta
taccatttcacaaaagacactgctcagaaccaggtgcaagttcagaattttggagaaccc
tttttcttagtaattcatgaaggtgagacattggctgaaataaaggtacgagtacagaag
aaattgcaagtgccagatgaggagtttgctaagtggaggtttgcgttcctctcattaggt
cgtccagagtaccttcaggatcatgatatagtgtcaaatcgttttcagagacgagatgtt
tatggtgcttgggagcaatatcttggattggagcactctgacactgctcctaaaagagct
tatgcagctaatcagaatcgccacacatttgagaagccagtgaaaatatataattaa
DBGET
integrated database retrieval system
