Eucalyptus grandis (rose gum): 104442288
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Entry
104442288 CDS
T03547
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104442288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104442288
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104442288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
104442288
NCBI-ProteinID:
XP_010053963
UniProt:
A0A059CIX8
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Position
4:complement(38358353..38367209)
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AA seq
780 aa
AA seq
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PLRRCRVSRSDHPPPRPGPPPPQPRPPSRSDLPLPLSDPPLRSPSLLPPPQTLAPPPPPL
SPSPSPPPPPLPPHSPPPPPPPPPPRPTLAPPRTRSRSRSLRLRSPSSSSSISSAFSAPS
FSFGSTPAASAPSLFGTPASAPSIFGTPASAPSLFGTPSSAASGGSSPFGMAQPAASASP
FGSSSPSLSFGPSGTSASTPFGTPAPSSGASSGSSLFGAATSGAPPFGAASGASSPLFGA
APTSSSTSTTTAAPSLFGTPPSAAAAASGASSFGGTASAASSGAPVFGTSLSTAPPLFGT
TATSASPSFFAPAAATAAAASTTAAFSAASASASATTPSFSNIFPSSSAATSSPFAAPTG
FSFAKPTSSSSPSLTPSATSTTTSPFSLAPSSSSSQSSFSFAPSAPPSTASSAKPTSFSF
VPSAAPSFSTVTTTTSASTPSAVSSSASVSSSTTLPSFAAGFSSAAATSAASAVTAGSLT
PASSFTGFGVTATPASSATASSVPSFSLSTKTSTPASSPAPSATTVPAFSIPATTSASTT
GSSASTTAAPTSSLIVASSSGTTSSTSAPAAVPKLPSEIVGKTVEEIIKEWNAELQERTG
KFRKQANAIAEWDKRILQNRDVLLRLEIEVAKVVETQASLERQLELIETHQQEVDKALQS
IEGEAERIYKDEHGLLLDDEAASTRDAMYEQAELIERELEQMTEQIKTVIQTLNSSQGGE
LDTIDGMTPLDVVVRILNNQLSSLMWVDEKAEEFSSRIQKLARQGSAAERELMGPKLWMS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
ccgctccgacgatgtcgggtttctcgttcggatcatccgccgccgcggccgggtcctcct
ccgccgcaaccgcgtcccccttcgcgttcggatcttcccctcccgctttcggatcctcct
ctgcgttcaccttcgctccttcctccgccgcaaaccctagctccgcctccgcctcccctc
tctccttctccttcgccccctcctccgcctctccctccccattcgccgccgccgccgccg
ccgccgcctccaccgcgtccaaccctagctcctccccgcacccgctcccgctcccgctcc
cttcggcttcgctccccctcttcctcttcgtcgatttcgtcggcgttctccgctccttcg
ttctcattcggctccacgccggcggcttccgcgccgtcgctcttcggcacgccggcttcc
gcgccgtcgatcttcggcacgccggcttccgcgccgtcgctcttcggcacgccgtcgtcg
gccgcgtccggaggatcgtcgcccttcggaatggctcagcctgccgcgagcgcctcgccg
ttcgggtcgagttccccttcgctatcgttcggtccgtcggggacctccgcttctactccg
ttcggtacgcccgcgccgtcttccggtgcgagctccggttcgtcgttgttcggagcggcc
acttccggtgcgcctccgttcggggcggcttcgggtgcaagctcgccactgttcggtgcg
gctccgacgtcgtcatcgacttcgaccacaaccgccgctccgtctctgtttgggacgccg
ccttccgccgccgccgccgcctctggagcgtcctcattcggaggaactgcttcagccgct
agctctggtgcgccagtgtttgggacaagtctgtccacggctcctcccctgttcggtaca
actgcgacctccgcgagtccaagtttcttcgccccggccgcagccacagccgccgccgcc
tccaccacagctgcgttttccgcagcttctgcatcggcttcagcaactactccttcattt
tcgaacatatttccttctagttcagccgcaacatcatctccttttgctgctcctacgggt
ttttcctttgccaaacccacgagctctagctcgccgtctttaacaccctctgcaacatcc
acaacgacctcacccttctcgttggcaccatcttcctcatcttcgcagtcctctttcagt
ttcgcgccgtcagccccgccctcgactgcgtcttccgcgaagcctacgtccttttctttt
gtcccatctgcggcgccgtcgttctctactgtcaccactaccaccagcgcgtcgactcca
tctgcagttagtagttcagcttcggtgtcctcttcgacgacattgccttcatttgctgcg
ggcttctcgtcggcggctgcgacttcagctgcatcagcagtcactgcaggatctttgaca
cctgccagttccttcacgggatttggagtgaccgcaacgcctgcttcttcagcgactgct
agttcggtcccaagcttttcgttgtctaccaaaacttcaacaccagcttcatctccggca
ccttctgccaccaccgtccctgcttttagcatccctgctacaacttctgcatcaacaaca
ggttctagtgccagtacaactgcagctccaacatcatctcttattgtagcctctagtagc
ggaacaacatcaagcaccagcgctccagctgctgttccaaaactaccttcagagatcgta
gggaagactgttgaggagattatcaaggagtggaatgctgagctacaagagcgaacaggg
aaattccggaagcaggcaaatgccatagctgagtgggacaagaggattttgcagaatcgt
gatgttcttcttaggcttgagattgaagtggcaaaagtggttgaaacgcaagctagcctg
gagagacagctggaattaattgaaactcatcagcaagaggttgacaaggctttgcagagc
atagaaggagaagctgaacgtatttacaaggatgagcacggactattgcttgatgatgaa
gctgcgtccactagagatgctatgtatgaacaagctgagttgatagagagggagctggag
caaatgacggaacaaattaaaacagtcatccagactctgaattccagccagggtggagag
ctcgacaccattgatggcatgacaccactggatgttgttgtcaggattttaaacaatcag
cttagctctttaatgtgggttgatgagaaggcagaggaattttcctcacgtattcagaag
cttgcaaggcaaggttctgctgcagaacgcgaattgatgggcccaaaattgtggatgtct
tga
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