KEGG   Eucalyptus grandis (rose gum): 104451930
Entry
104451930         CDS       T03547                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase FANCM
  KO
K10896  fanconi anemia group M protein
Organism
egr  Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:egr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:egr03400]
    104451930
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     104451930
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 104451930
NCBI-ProteinID: XP_010064786
LinkDB
Position
6:complement(36737094..36751923)
AA seq 1383 aa
MAMASAGPPIVIDDEEDDDFDWDAAVREIDAACEGSRPPASADPFRTPRVALAPLGNAAA
PRVLGKKCNGVSRQSTLDSFVGRSSTGAEPGNSAVRVEERMRVDRDDAASCVEIDPEAAK
TWIYPVNVPLRDYQFSITKTALFSNTLVALPTGLGKTLIAAVVMFNYFRWFPEGKIVFTA
PSRPLVIQQIEACHNIVGIPQEWTIDMTGQMSPDKRVHFWKTKRVFFVTPQVLEKDIQSG
TCLVKHLVCLVIDEAHRAMGNYSYCVVVRELIARPVQLRILALTATPGSKHQTIQHVIDN
LIISTLEYRNESDPDVSRYVHDRKLELIEVAMGKEAIEINDLLLNVIRIYAARLNAMGIL
LNRDYQALSPSDLLNSRDRFRQAPPPELPQLKYGEVERFFGALITLYHIRKLLSSHGIRP
AYEMLEEKLHQGSFASLMSRNEDIHKAKLLMQRNLSHGAPNPKISKMLEVLIDHFKKNDP
QRSRVIIFSNFRGSVRDIMDALSNIGDIVKAAQFVGQSSGKSLKGQSQKVQQAVLEKFRA
GGYNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMVQRMGRTGRKHDGRVVVLACEGSE
LKGYRRKQANSKAISKHMRNGGIASFNFHLSPRMIPHIFKPDVQFVELSIEKFVPRGKKV
KDDDIVEMPMWKKNLTVAESDIIAKYFNNSGNKWRPSLIAFPHFQTFPSRVHVVMHSCRT
GMMIDAMQHLQGVLFSKDKDGLSVEEKDFSLEQLGSKSVEQHDNGGQDLLNFDDCPDIYK
QMSISDAPVQTSETADRRCLSTIANKTSPVHSCLFSSDFVSVDNLGNVLILSVPSLPSKK
DTQSDDIYLKCPKKDSGHFLAAAQRSEEVCMPFGDSVQRASAQTGCLKSEAQALSTVFDF
EAQQNEPTAMEMKNNEIENLIGELPDGGEDTNGTLEALKVREPFPPASGCNDDEEDTEFS
PRLTNYIESGVVPESPINGESHGKDKSAFIIPDLVLSPILCSNHLFMPSSQGKKKELIQE
FDSCRGIVSGSPTYNRIQTPVANIKGGSDESKCGHASPDNRMTPDNDINIGHSKNWCLTP
NTNSNSVKGRKKLRRLRRVGDCVRRQDLNRKDNCIVPTVESDGFFPGASTFQNQNNYYQG
KKTTINNARAYIEEEAEVSSGDEASEDEEDDLDRDTYEDSFIDDGTNPTAASTQDITCTV
DMMAVYRRSLLSQSPNGWRMSESTSSSGKSLHSLYAPRSQLNNQSEGESAESLSKRHERI
SKRMPSVASASATDGGSDVVERLKRKSRFHDPDSVTAINLEREFLSQEDIRNGEPVHQNH
ANGVPADCDLFSDDHFYEGIDLDAVEAQATLLLQRSSECSKEKEEMILPSAGYVGSPSFD
LGI
NT seq 4152 nt   +upstreamnt  +downstreamnt
atggccatggcttcagccggtcctcccatagtcatcgacgacgaggaagacgacgatttc
gactgggatgcggcggtcagggaaatcgacgcggcttgcgagggctcgaggccgcccgct
tctgcggacccgtttaggaccccgcgcgtcgcgctcgcccccttgggcaatgcggccgcc
cctcgcgtcctcggcaagaagtgcaacggggtttctcgacagtcgacgctggacagcttc
gtagggaggtcctcgacgggagccgagccgggcaattcggcggttcgggtggaggagcga
atgcgggtcgaccgtgatgatgcggcgagctgcgtcgaaattgatcccgaggcggctaaa
acttggatatacccagtgaacgtgccgcttcgtgattatcagttttctataacaaagact
gcacttttttcgaatacattggttgcgttgccaacgggacttgggaagacacttattgct
gcggtcgtgatgtttaactatttcagatggttccctgaggggaaaatagtcttcaccgct
ccctctcgtccacttgtgatacaacaaatagaagcatgccataatattgtcggaatacca
caggaatggacgatcgacatgactggccagatgagccctgataaaagagttcacttttgg
aagactaaacgagtattttttgttactcctcaagtgctagagaaagacattcaatccgga
acatgtttggtgaaacatctcgtctgcctggtgattgacgaggcccatcgagccatggga
aactattcatattgtgttgttgttagagagttgatagcccgacctgtgcagctgaggata
ttagctttaacagcgacaccaggatcaaagcaccagaccattcagcacgtaattgacaat
ttgatcatatcaacccttgaatatcgcaatgaaagcgaccctgatgtcagccgatatgtt
catgacagaaaactagagttgattgaggtggctatgggcaaagaagctatcgagataaat
gatttgcttttgaatgtcatccgcatctatgcagctcgacttaatgcaatgggcatactg
ctgaatcgggattatcaagctttgagtccgtcagacttgcttaattcaagggatagattt
cgtcaagcacctccgcctgaacttccgcaattgaaatatggagaggttgagaggtttttt
ggagccctcatcaccctttatcacattcgcaaattactctcaagccatggcataaggcca
gcatatgagatgcttgaagaaaagttgcaccaggggtcttttgcgagcttgatgagtaga
aatgaggatattcataaagcgaaactcttaatgcagcggaacttatctcatggtgcacct
aatccaaaaatatcaaaaatgttagaagtgttgattgaccacttcaaaaaaaatgatcct
caacggtcgagggttatcattttctcaaactttaggggaagcgtcagggatattatggat
gcattgtcaaacattggggatatagtcaaagcagcacaatttgttggtcaaagttcagga
aaatcacttaagggacagtcacaaaaggttcagcaggctgttctggagaaatttcgagct
ggtggatacaatgtcattgtagccacatcgattggtgaagaaggtcttgatatcatggaa
gttgacctagtaatatgttttgacgctaatgtctcacctctacgtatggtacagcgcatg
ggaagaactggaaggaaacatgatggacgtgtggtagtgttagcttgtgaggggtcagag
ctgaagggttaccggagaaagcaagctaacagcaaggcaattagtaagcacatgcggaat
ggaggaattgcaagttttaatttccatttgagtccccgaatgattccacatattttcaaa
ccagatgtccagtttgttgagctatcaattgaaaagttcgttcctcgtggaaagaaagtt
aaagatgatgacattgttgagatgccaatgtggaagaagaatttaactgtcgcggaatct
gatatcattgccaaatacttcaacaattctggaaataaatggagaccatctcttattgct
tttcctcacttccagacttttccatctagagtgcacgtagtcatgcactcatgcagaaca
ggtatgatgatcgatgcaatgcaacatttgcaaggagtacttttttctaaagataaagat
ggtctctctgttgaggagaaagacttctcactcgaacaacttggatctaagtcggtagaa
caacacgacaatggtggtcaagatttgctgaactttgatgattgtcctgatatatataag
caaatgagtatatcagatgcacctgtgcagacctcagaaactgcagatcgccgttgcttg
tctactatagctaacaaaacttctccagtgcactcttgcctctttagttcagattttgtg
tctgttgacaatcttggaaatgtcctaattttgtctgtcccttcacttccttccaaaaaa
gacacacaaagcgatgacatatacctgaaatgccccaagaaagattctggccatttctta
gctgcagctcaaagatcggaagaagtgtgcatgccatttggggattctgtgcaacgagct
tctgctcaaacaggatgtctgaagagtgaagctcaggccctatctacggtttttgacttc
gaagctcagcaaaatgaaccaacggctatggaaatgaagaacaatgagatagaaaacctg
attggagaattgccagatggaggagaagataccaatggaacactggaagctttgaaagtc
agagagccatttcctccggccagtggatgtaatgatgacgaggaagatacagaatttagt
ccccgacttaccaactacatagaaagtggagttgttcctgaatctcctattaatggagaa
tcgcatggtaaagacaaaagtgcctttatcatcccagatcttgttttgtctcccatactt
tgcagcaaccacctctttatgccatcaagtcaagggaaaaagaaggaacttatacaagaa
tttgattcatgtagaggaattgtttctggttcgcctacatataacagaatacaaactccc
gtagcaaacattaagggtggttctgacgaaagtaaatgtggccatgcttctccagacaat
cgcatgacaccagataacgatatcaacatcggccatagtaagaattggtgcttgactcct
aatactaattcaaacagtgtgaaaggtagaaagaagctcagaaggctgcgaagagttgga
gactgtgtacgtaggcaggacctgaatcgcaaagataattgcattgtccccacggtggaa
tctgatggtttttttcctggtgccagcacatttcaaaatcaaaataactattaccagggt
aaaaagacgacgatcaataatgccagagcctacattgaagaggaagctgaggtatcttcg
ggagatgaagcatctgaggatgaagaagatgaccttgacagagatacatatgaggatagc
ttcatagatgacgggacaaatcctacagcagcaagtactcaagacattacttgtacggtt
gatatgatggcagtgtacaggcgttctttgctaagtcagtcaccaaatggatggcggatg
agtgaaagcacaagttcttcaggaaagagtctgcactctttatatgcacccagaagccaa
ctgaacaatcagtccgaaggggaaagtgctgaaagcttgtcgaaacgccatgagagaatc
tcgaaaaggatgccttctgtggctagtgcttcagcaacagatggggggagtgatgtggtg
gaaagattgaagaggaaatcaaggttccatgatccagattctgtcaccgcaatcaacctg
gagagagaattcctttctcaggaagatattagaaatggagaaccggtccatcagaatcac
gctaatggagttcccgccgattgcgacctcttctctgatgatcacttctacgagggcatt
gatctcgatgctgtagaagctcaagctacgttgcttctccaacgcagttctgagtgctcc
aaggagaaggaagagatgattcttccaagtgctggctatgttggttctccatcgtttgat
ctcggaatatga

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