Erythranthe guttata (spotted monkey flower): 105949080
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Entry
105949080 CDS
T07346
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03022
Basal transcription factors
egt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105949080
09124 Replication and repair
03420 Nucleotide excision repair
105949080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egt03021
]
105949080
03400 DNA repair and recombination proteins [BR:
egt03400
]
105949080
Transcription machinery [BR:
egt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105949080
DNA repair and recombination proteins [BR:
egt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105949080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
Tfb4
FF
Motif
Other DBs
NCBI-GeneID:
105949080
NCBI-ProteinID:
XP_012827803
UniProt:
A0A022PSV5
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MSRQESSTNEGRKFKRGDEDEDDEEDGKGREAWERTYADERSWESLQEDESGLLRPIDNK
TLYHAQYRRRLRTSTTTRIQKGLIRYLYIVIDLSRAAGETDYKPSRMVVVARQVEAFIRE
FFDQNPLSQIGLLTLKDGVANSLTDLGGSPESHIKALMGKLTSSGDASLQNGLDLVHSHL
NQMPTYGHREVLILYSSLNTCDPSDIMETIQKCKASKIRCSVIGLSAELYICKYLCQETG
GSYYVAVDEHHLKELVFEHAPPPPAIAEFAIANLIKMGFPQRAAEGVISICSCHKEAKVG
GGYTCPRCKARICDLPTECQICGLTLVSSPHLARSYHHLFPITPFDDVAPSVSSDPRYLA
KNCFGCQQTLLNPGNMPGSRVCCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKSNGTV
EG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggcaagaaagtagtaccaatgaaggaaggaagtttaagagaggagacgaggat
gaagatgatgaggaagatggtaagggccgtgaggcgtgggagagaacttatgcagacgag
cgatcatgggagtctctgcaagaggatgaatccggtcttctccgaccaattgacaacaaa
acgctgtaccatgctcagtatcgaagacgccttcgcacgagtaccactactcggattcag
aaaggattgattcgttacttgtacattgtcatcgatctttctcgggcagctggagagacg
gactataaaccaagccgcatggtcgttgttgccagacaagtggaggctttcattagggag
ttcttcgatcaaaaccctttgagtcaaatcggattattgacattgaaagacggagtagca
aattccctgacggatcttggtggaagtcccgagtcacacatcaaagctttgatgggtaag
ctgacaagctcgggcgatgcatccctccaaaatggcctcgatcttgtgcacagccaccta
aatcagatgccaacatatgggcatcgtgaagttctgatattgtattcctcgcttaacact
tgtgatccgagtgatattatggaaaccatccaaaaatgcaaagcttcgaaaatcagatgc
tcggttataggtctctctgctgagctctacatttgcaaatatctttgtcaagaaactggc
ggatcgtactatgtagccgtagatgagcatcacttgaaagaattggtctttgagcatgca
ccgccacctccagctatagcggaatttgcaattgcgaatttgatcaagatgggatttcct
caaagagcagcggaaggtgtaatttcgatctgttcttgtcataaagaggctaaggtcggt
gggggctacacttgtccgagatgcaaagcacgtatttgcgatttgcctacagaatgccag
atttgtggactgacactcgtttcttcacctcatctggctcgatcttaccaccatctattt
cctataaccccgtttgatgacgtggcaccatcggtttcaagtgatccacgctatcttgca
aagaattgctttggttgccaacaaactctcctgaatcctggaaatatgccgggttctcgt
gtttgttgtccgaaatgcaagcagtatttctgccttgattgtgacatttacattcacgag
agcttgcataattgcccaggttgtgagagcttccgccattctaagtccaatggtaccgtt
gaaggatga
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