Erythranthe guttata (spotted monkey flower): 105949977
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Entry
105949977 CDS
T07346
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105949977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egt03400
]
105949977
Enzymes [BR:
egt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105949977
DNA repair and recombination proteins [BR:
egt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105949977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
BRCT
PTCB-BRCT
RNA_ligase
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
105949977
NCBI-ProteinID:
XP_012828746
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MSETKFSVMVSLFNWMQKSKSSSVKRSKFRKFLDTFCRPSNGDDYFSAIRLILPSIDRER
GSYGLREHVLATCLIDALGMSRDSPDSQHLLNWRKGGPKSGSFAGNFSLIAAEVLQRRQG
MTSGGLTIKELNELLDRLASCENRSEKTSILSDLIRKTNAQEMKWIVMIILKDLKLGISE
KSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKPVRPQLALRVSNAAAA
WKKLHGKEVIVECKFDGDRIQIHKNAAGINFFSRNFLDHPEYEHGMSEIIRENILVDRCI
LDGEMLVWDKSTNRFAEFGSNQEIAKAAKDGLDGDRQLCYVAFDILYVGDTSVIHQSLKE
RHQLLRQVVKPIVGRLEILVPNGGLNAHRPAGEPCWSLVVHDVDGVEKFFKETIENRDEG
IVLKDLASKWEPSDRSGKWLKLKPDYIRAGSDLDVLIIGGYYGSGRRGGEIANFLVGLAE
RPAPNTYPRRFVSFCRVGTGLSDEELNAVVSKLKPYLRKYEYPKKAPPSFYQVTNNSKER
PDVWVESPEKSIVVSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFIEL
VHSSNGTMQRATDSTVVQENKPKRTKLSREKKNVSAVPSHFTQTDVSQVKAGTSIFSNMI
FYFVNAPSSHSLDSLHKMVVENGGTFSMNLNNLVTHCIASESKGIKFQAAKHQGDVIHYS
WLSDCCTQKKLLPLQPKHFLYLSDESKKKLEEEIDEFSDSYYMDLNVADLKQILSNVDKV
DDSKAKEYYKKKFCPREEWVRFHGCRIYFHFPRQILKHKSLEIPFGLAMRRMKIEICMGG
GYVAETIAHATHLVIVCSTQIDVDFDTLLKSLSELEKRLLHRRSLQIVKSQWLDDCFEKD
QRLPEDSYSLKPPDFQETLTGDGSDPNFNIEECHSLEERLDDASSSRKAGKKDEGTSDKP
RIVSLPNTDNKKKRGRPIGASTKKGKSVVNKPRRTRPRAGNKPAKIHESESDKDVSSEEK
KDSTEIVEIKAKSDFNKPEERAQIKTKPSEIVENELDSRAFSEKQTQCSEIANLFLPGFQ
KQEEVEDYATERGKAVEPIVEEHSKFGQRFDGIKEVGSSGQESGTHYSDRIEDAVDPVQA
MLFNMLPILATKKAESDSITAPLEVKTGDPNPTREEEKVLLDGETQPVKKRKVSYKDVAN
ELLKDW
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagacaaagttcagcgtgatggtgagcctattcaattggatgcagaagagcaag
tcctcgtccgtcaagcgttccaaatttcgcaagtttctcgataccttctgccgccccagt
aacggcgacgactacttctccgcaatccgccttatccttcccagcatagaccgagagcgc
ggctcctacggactccgggagcacgtgctggccacgtgcctcattgacgccctcggcatg
tctcgtgactcccccgactctcagcacctcctcaactggcgcaagggcggccccaaatcc
ggctccttcgccggaaatttctccctcatcgccgccgaggttttacaacggaggcaaggc
atgacttcagggggactgactataaaagaattaaatgaactgcttgatcgattggcctct
tgtgaaaataggtcagagaagacttctatcctttctgatttgatcaggaaaacgaatgct
caagaaatgaaatggattgttatgataattctcaaagatcttaagttgggaatcagtgaa
aagagcatatttcatgaatttcaccctgatgctgaggacctgttcaatgtaacatgtgat
ctaaagctagtttgtgaaaagttgcgagatcgtagtcagcggcataagcgccaggacatt
gaagtaggcaaacctgtccgccctcaactagctctgagggtcagcaatgcagccgcggca
tggaagaagcttcatgggaaggaagttattgttgagtgcaaatttgatggtgatcgcatc
caaatccataaaaatgcagcaggaataaattttttctcgaggaattttcttgaccatcca
gaatatgaacatggcatgtcagagattataagggagaatattttggttgacaggtgcatt
cttgatggtgaaatgttggtttgggacaaatctacaaatcgatttgcagagtttggttca
aatcaagaaatagccaaggccgcaaaggatgggcttgatggtgatcgacagttatgctat
gttgcatttgacattctttacgttggagataccagtgttattcaccaaagcttgaaggag
agacatcaacttcttcggcaagttgtcaaaccaatagtaggacgtttggagattttggtc
cctaatggtggtcttaatgcacatcgtcctgctggggaaccatgttggtcgctagttgtt
catgatgttgatggcgttgagaaatttttcaaggagaccattgagaacagagatgaagga
attgttttgaaagatcttgcctccaaatgggaacccagtgaccgcagtggaaagtggctg
aagttaaagcccgattacatccgagcgggctctgatttagatgtccttataataggcggg
tactatggttctggacgtcgtggaggtgagatagcaaattttcttgttggccttgctgag
cgtccggcgccaaacacatatcccagacgatttgtttcattttgcagggtcggtacagga
ctttctgacgaggagcttaatgctgttgtctccaaattgaagccttacctcaggaaatat
gaatatccgaagaaagcacctccaagtttttatcaagttacaaataattcgaaggagaga
ccagatgtttgggttgaaagcccagaaaaatcaattgtagtttccatcaccagtgatatc
cgaacaatcagatccgaggtatttgctgctccatatagcttgagatttccacggattgat
cgagtgagatatgacaaaccttggcacgagtgccttgatgttcagtctttcattgaatta
gtacattcaagcaatggtaccatgcaaagggcgacagattccacagttgtgcaggaaaat
aaaccaaaacgaacaaagttgtctagagaaaagaagaatgtttctgctgttccttcccac
tttactcagacagatgtttctcaagttaaggctggaacatcaatattttcaaacatgata
ttctacttcgtaaatgcaccttcgtcgcactctcttgattccttgcacaaaatggtggtt
gagaatggtggcacattctcaatgaatctgaataatttggttactcactgtattgcctct
gaaagtaaagggatcaagtttcaggctgcaaagcaccaaggagatgttattcactactct
tggctttctgactgttgcacgcagaagaagcttcttcctctacagccgaagcacttcctt
tacctctccgatgaatcgaagaagaagctagaagaagaaattgatgaattctcagactcc
tactatatggatcttaatgtggcagacctcaaacagattttaagtaatgttgacaaggtt
gatgattctaaagcaaaagagtactacaagaaaaaattctgcccaagggaggaatgggtt
cgctttcacggttgtcgcatttacttccactttcctaggcaaattctaaaacacaagagc
ttggaaattccatttggacttgcaatgagaaggatgaagatcgaaatttgcatgggcggc
ggctatgtagctgagacaattgctcatgctactcatttagtaattgtttgtagtactcaa
atagatgtcgactttgatacactactgaaaagtttatcggagctggagaagcgccttttg
cacaggagaagcttgcaaattgtcaagtctcagtggttagacgactgctttgagaaggac
cagaggttgccagaggacagttacagtttgaagcctccggattttcaagagaccttaact
ggagatggtagtgaccccaatttcaatatagaagaatgtcatagcttggaagaaaggctg
gacgatgcttcatcttctcgcaaagctggaaaaaaagacgagggtacatcagacaagcca
agaattgtcagcttgccaaatacagacaacaagaagaaaagaggaagacctattggagcg
agtacaaaaaagggaaaatcagttgttaacaagccccgaagaacaaggccacgagctgga
aacaaacctgctaagatccatgaaagtgaatcggataaagatgtttcttcggaggagaag
aaagactccactgagattgtagaaattaaagcaaaatcagattttaataaacctgaagaa
agggctcagattaaaaccaaaccatctgagattgtcgaaaatgaattagatagtcgtgct
ttttcagagaagcaaacacagtgttctgaaattgcaaacttgttccttcccggatttcaa
aaacaggaggaagttgaagattatgcaacggaaagaggcaaagcagttgaaccaattgtt
gaagaacatagtaaatttggacaaaggtttgatggaattaaggaagttggatcctccgga
caagagagcgggacccactacagtgatcggattgaagatgctgttgatccagttcaagcc
atgttattcaatatgttgccaatccttgctacaaagaaagctgagagtgattcaattact
gcccctctagaggttaaaacgggcgaccctaacccgacccgcgaagaggagaaggtactt
ttagacggtgaaacgcaacccgtgaagaaaaggaaagtgagctacaaggatgttgctaat
gaactgctcaaggattggtaa
DBGET
integrated database retrieval system
