Erythranthe guttata (spotted monkey flower): 105956748
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Entry
105956748 CDS
T07346
Name
(RefSeq) polyadenylation and cleavage factor homolog 4 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105956748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egt03021
]
105956748
03019 Messenger RNA biogenesis [BR:
egt03019
]
105956748
Transcription machinery [BR:
egt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105956748
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
105956748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
zf-C2H2
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
105956748
NCBI-ProteinID:
XP_012836097
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MEMESTRRAFDRSMSKEPGLKKPRLIEDPTAQDRISNGRGGLVQRPTVSNSGIGAGSRVQ
SGDSMRGPYQHQVAPQLHQELVTQYKTALAELTFNSKPIITNLTIIAGESSHAAKAIAAT
ICTNIIEVPSEQKLPSLYLLDSIVKNIGKDYIRYFASRLPEVFCKAYRQVEPAIHQGMRH
LFGTWKGVFPPQTLQMIENELGFTTAANGSPSRTTSRQDSQAQRPAHSIHVNPKYLEARR
LQTTRARDSVSDSGEALLTSHEDVEELERAASISSGRSWADPYAKPIQHHHRDQVNGPVR
GKSSSVPYSDSEYGSSVLGRPGLETGRVVENLKERGYDRSWYESGSNVTGMSHQKNGFGL
KRGFEGYAGHESANSNSDLQLNQKIVGRNTVEMSENWKNSEEEEYMWDEMNSRSTVRDAE
DASKDHWGPDNHVQLDFQSHLRRPQNVHDIGSRDDDEASADSISMDLGQLASGTQMPLWS
RKLHPTESMMLSEGGKSVSGYSEAYPTVLKNSQTAVGRAHSQSHLSPSHIGGSSFKLSTN
PVPVPKVAITQQGKLPGAAPSLKRSVIPQRPPSPSFPNQLLNNFAERNQTSVGPPTDPRR
PLGQTSRQKLQPQSLRSSSTLIPSVQQRKNIPSAQKRNLEVSELDMPSQVSGSESRSTRG
NSSSDQSNPLTVHSPSKSISSISLDAVVKSGIQGIGSKLLPTGSKKKVEHPSLPTGLPPL
SLAGIGSEQTPSAVSSSSNPFSSLLSSLVAKGLISSSKSDSLMVPVDKVPAVATSSSSPV
SSVPFTIPKPLVSITDIPSSSLEPAVKASNDLLQSTEKIKQLIGFEFKPDVVRNSHPDVI
SDLVSDLPHECTICGLRFKLQERLGRHMEWHASKFSDYNPNSNMSRKWYASVVDWVAGIG
LLHLQGSPSDMLEASGEMLETCEQMVPADESQCACILCGELFEDFYSQERDEWMYKAAVY
LTIPSSESVERIATSNDSAILGPIVHANCVSKDSIHDLGLVSDVKLVSTYCFPCSFLQLI
KKFSCEVYPTMLQ
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagagtacgcgtagagcatttgatagatctatgtcgaaggaaccgggactc
aagaaacctaggctcatcgaagatcccacagctcaagatcgaatctccaatggccgtggt
ggattggttcaaaggccgaccgtttcgaactccggcatcggtgcaggctcgcgggtccag
agcggtgactctatgcgtgggccctaccagcaccaggtagctccgcagttgcatcaggag
ctggtgactcagtacaagactgcgttagctgagctgactttcaactcaaagccaataata
acgaatttgacgattattgccggcgagagttcgcatgctgccaaggccattgcagccact
atctgcaccaatattattgaggttcctagtgagcaaaaactgccttctctgtatttatta
gacagtattgtgaagaacattgggaaggattacataagatactttgcttccagattacct
gaggttttctgcaaggcatacaggcaggttgaacctgcgatacatcagggtatgcgccac
ctttttggaacctggaaaggagtcttccctcctcagacacttcagatgattgagaacgag
cttggattcactactgcggcaaatggttcaccatcaagaacaacatctaggcaggactca
caagctcaacgtcctgctcatagcattcatgtaaatcctaagtatttggaggcaaggcga
ctgcagaccaccagggcgagagattctgtcagcgattctggtgaagcgctgttgacctcg
catgaggatgttgaagaacttgagagagcagctagtattagttcgggtagatcatgggct
gatccttatgctaagcccattcagcatcaccacagagatcaagtaaatgggccagttcgt
ggcaaaagttcaagtgtaccgtattcagattctgaatatggttccagtgtattagggcgt
ccaggcttggaaactggcagggtagttgaaaatcttaaagagcgaggatatgacaggtct
tggtatgaatcgggaagtaatgtgactgggatgtcgcatcagaagaatggttttggtctg
aaacgtggatttgaaggctatgctggccacgagtctgcaaattccaactcagatctacag
cttaatcaaaaaatagttggtaggaacacggtcgagatgagtgagaactggaagaactct
gaggaagaggagtatatgtgggacgagatgaactctagatccactgtacgcgatgcagag
gatgcttctaaagatcactggggacctgataatcatgttcaattggactttcaaagccat
cttcgaaggccacagaatgtacatgatattgggtcaagggacgacgatgaagcctcagct
gattcaatatctatggatttgggccaattagcttctggtactcaaatgcctttgtggtca
cgaaagctacatccgacagaaagtatgatgctttcagaaggtggtaaaagcgtatcaggt
tactctgaggcatatcctacggtgttgaaaaactctcaaactgcagtgggcagggcacat
tctcagtctcatctgagcccatctcatattgggggttcaagctttaagctttcaacaaat
ccggtgccagtacctaaagttgctataacacaacaggggaagcttcctggagcagcacca
tccttaaaacgatcggtaatcccccaacggcctccatcaccttcttttccgaatcaacta
ctaaacaattttgctgagcgcaaccagacctctgttggccctccgactgatccaagaagg
cctctgggtcagactagcagacagaaattgcagccccaaagtttgcggtcttcttctact
ctgataccttctgttcagcagaggaaaaacattccctctgctcagaagagaaatcttgaa
gtctctgaattagatatgccgtcgcaagtttcgggctctgaaagtcgttcgacgaggggg
aattcatcatcagaccaatcgaatcctcttactgttcactcccctagcaaatctattagt
agcatttcattggacgctgtagttaagagtggaatacaaggtattggaagcaaattgcta
cctacgggttctaagaaaaaggtagaacatccatccttgccaactgggctacctccctta
tcattagcaggtattggctcagaacagacaccgagtgcagttagttcctcctctaatccc
ttttctagtctgttaagctcactggttgctaaaggtttgatatcttcttccaagtctgat
tcactgatggtacctgtggacaaagttcccgcagttgcaacctctagttcaagtccagtt
tcttctgttccattcactataccaaaacctcttgtctctatcacagatataccttcttct
tcacttgagcctgctgtaaaggcttctaatgatctgctccagtcgacagaaaaaataaaa
cagcttattggttttgaattcaaacccgatgtagttcgtaattcgcatccagatgtgatc
agtgatcttgtctctgaccttccacatgagtgcaccatatgtggtcttagatttaaactc
caagaacggcttggcagacacatggagtggcatgcgtcgaagttttctgattataatcct
aatagcaatatgtcaagaaagtggtacgccagtgtagttgattgggttgcaggaattggt
ctccttcatcttcaaggtagtccttcggacatgttagaagcttcaggtgaaatgttggaa
acttgtgagcaaatggtccctgccgatgagagtcaatgtgcatgtattttgtgtggcgaa
ttgtttgaagacttctacagtcaagaaagggatgaatggatgtataaggcagctgtttac
ttgaccataccatcctcagagtcggttgaaaggattgcaactagtaatgatagtgccatt
ctaggtcctatagtccatgctaattgcgtatcgaaagattcaattcatgacttgggactc
gtttctgatgtcaaattggtaagcacttattgctttccttgttcatttttgcaattgata
aaaaagttctcgtgtgaggtatatcctacaatgctccagtga
DBGET
integrated database retrieval system
