Erythranthe guttata (spotted monkey flower): 105958755
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Entry
105958755 CDS
T07346
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105958755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egt03021
]
105958755
03019 Messenger RNA biogenesis [BR:
egt03019
]
105958755
Transcription machinery [BR:
egt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105958755
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
105958755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
zf_UBZ
zf-C2H2_4
ACAS_N
Motif
Other DBs
NCBI-GeneID:
105958755
NCBI-ProteinID:
XP_012838214
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MDRTSRFQNNLPLSSGSFNKPPPIQNDGVAIKPSQPTLHDRFTSYLKEREEELRVFGGGA
ALPLSTDEIVRLYEIVLLELTTNLKPVITDLTIIAGEQIAHSEGIADAICARIIEAPVDQ
KLPSFYLLDSIVKNIGKDYIKHFSARLPEVFCEAYAQVPPSMHQPMRRLFGTWGPDRYFP
VPVLQKIEVQLRLPPSVDGQSSGLTSTRASESPRQTQYIHVNPKYLEGQRPFGQSTVDTF
GTEGVSSSGRAGMTTSGLRAVKRSLPSAARITGSSSPYRIGPAGPISPSLEDFSTDNSPK
RVTLIQASAAYNNNSSGVDLRGPRALISAYGIDEREKNLNRKHNTAEELDLYGADEKMAL
RTWQNTEEEEFDWEDMTPASSLPPPGGRHNFIANRGNLSKAQFASVSNSSMIDDVSHTNS
GRGSSDKIAPNLRESLMLPHQQSQSHFNAKGGGGSFAENRNFLTGGELNPALTGNFSNTD
GKFRLPYDSTAPEIQSADAAAPLTKAWHPSKFQNSHIRPSLSALPSQMQIRGQFGMNNAV
DQLHSEQQLGRSQANLPHISSIRPGPVPANLQHTAQPNLYLPSPYSEHIPSNASVPPMNY
RYFGPSGTTSSNLVPGFPSFHVPRPTLQSLPRGPFPGTAQPLPIGSNANQVAQNPSAGPA
LSGLINSLMAQGLISLSNQDSVGVEFDPDILKVRHESAITSLYAELPRQCKTCGLRFKSQ
EEHSSHMDWHVNKNRTLRNRKAKPSPKWFVNAAMWLSGTEAMGTEAVPGFMPAENSAEKE
EDEEMAVPADEDQNSCALCGEPFEDYYSDDLEEWMYKGAVYMHAPTGATVGMDRSQLGPI
VHAKCMSDSHAVSSENNKKDEEDST
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtacttcgagatttcagaacaatttgcctctgagcagcgggagtttcaacaag
cctccgccaattcagaacgacggcgttgcgattaagccatcgcagccaacgctccatgac
cgatttacctcctacctgaaggagagggaagaggagcttagggtttttggtggtggggca
gctttgcccttgagcacagatgaaattgtccgcctttacgagattgtgttgttggagctc
actactaatctgaagccggtgattacagatctcacaataatcgcaggagagcagattgcg
cacagcgagggcatagccgatgccatttgtgctcggattattgaggctcccgttgatcaa
aaactgccttctttttaccttttggacagcatcgtcaagaacataggcaaggactatatt
aaacacttctctgcgcgcttgcctgaggttttctgtgaggcatatgcacaagtacccccc
agtatgcaccagccaatgcgtcgcctttttggtacgtggggccctgacagatatttcccg
gtaccagtacttcaaaagattgaggtacaattgcggctccccccttctgtagatggtcaa
tcgtctggcttgacttctacaagagcttctgagtctcctcgccaaacacagtatatacat
gtaaatccaaaatatttggaaggacagcgtccttttggacagtcaactgtagatactttt
ggaactgaaggagtaagctcatctggtcgtgcaggcatgacaacttctggtcttcgtgct
gtaaaaagatccctgccatcagctgccaggatcactggttcctcctctccttatagaatt
ggacctgcgggtcctatatcaccttcacttgaggattttagtacggataattctccgaag
agagtcactctaattcaagcatctgcagcatataataataatagcagtggtgttgatctt
cgaggaccgagagctttgattagtgcttatggaattgatgagagagaaaaaaatttgaac
cgtaaacataatacagcagaggagctggacttgtatggtgctgacgaaaaaatggctctc
aggacatggcaaaataccgaagaggaagaatttgactgggaagatatgacccctgcttca
tctctgccccctcctggtgggagacacaactttattgcaaacagaggcaacttgtccaag
gctcagtttgcttccgtttctaattcgtccatgatcgacgatgtttctcataccaattcc
ggtcgtggatcaagtgacaagattgcgccaaatcttcgagaatccttgatgttgccacat
cagcagtctcagagccattttaacgcgaaaggaggtggtggttcttttgctgaaaataga
aactttttaactggtggtgaactaaatccggcattaacgggcaatttctcaaatacagat
gggaagtttcgtctgccctatgactcgacagctcctgagattcaatcagctgatgcagca
gctcctttaacaaaggcatggcatccttcaaagtttcagaattcacacattcggccctca
ctctctgctctcccctcccaaatgcaaatcaggggtcaattcggtatgaacaatgctgtt
gaccaacttcattctgagcagcaattgggtaggtcacaggcgaatttgcctcatatttcg
agtattcgccctggaccagttcctgcaaatctgcaacatactgcacagccaaatttgtat
ctaccctcaccttattcggaacatattccttcaaatgcatctgtaccacctatgaattat
agatactttggtccaagtggcactacttcgtctaatctagttccaggctttccatctttt
catgtacctcggccaaccttacagtctctaccgagaggtccttttcctggaacagctcag
ccattacctattggttcaaatgctaatcaagttgcccaaaacccatcagctgggccggca
ctttcgggtttaattaattccttaatggcccaaggattgatatcgttatcaaatcaggat
tctgttggagtggagttcgatccggatattctcaaggtgcgacacgaatcggctataacg
tctttgtacgccgaactccccagacagtgcaaaacctgcgggcttcgatttaaaagccaa
gaagagcacagtagccatatggattggcatgtgaacaagaacaggacattaagaaaccga
aaggcaaagccttcacccaagtggtttgtgaatgctgccatgtggctaagtggcacagag
gcaatgggaaccgaggcagttcctggttttatgcctgctgagaacagtgcggagaaggag
gaagacgaagaaatggctgttcctgctgatgaagaccagaattcttgcgcattatgtgga
gagccgtttgaggattattacagtgatgacctggaagaatggatgtacaagggggctgta
tacatgcatgcaccgactggcgcaactgtcggaatggacaggtcgcagttaggtcctatt
gtgcatgctaaatgtatgtccgactcccatgcggtatcatctgaaaataataaaaaggat
gaagaggattcaacttga
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