Elaeis guineensis (African oil palm): 105047130
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Entry
105047130 CDS
T03921
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu00040
Pentose and glucuronate interconversions
egu01100
Metabolic pathways
Module
egu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105047130
Enzymes [BR:
egu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
105047130
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_3
NosD
Motif
Other DBs
NCBI-GeneID:
105047130
NCBI-ProteinID:
XP_019706652
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Position
6:complement(28622081..28623871)
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AA seq
470 aa
AA seq
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MTNRSLLLVFHVLLWLVLSNTFPMLSAVTSHRKQSRVHKHEGSKDGRHDHDFDHFNSSST
SSAHHNGFYKPHSKIFDVISFGAMGDGISDDSKALKSAWKAACLIPGATVKIPSEFRFLI
RPVTLQGPCMPHLNLQIDGDIIAPTGVAAWPKSNLFQWMNLKWLNDFTIQGRGTFDGQGS
TFWNFSQSRHTQKEIKHQSLKMRPTAVRFYKSYNVTVRGVQIINSPQCHLKFDSSQGIKV
KNITISSPEDSPNTDGIHLQNTHDVEIKHSNIGCGDDCVSIQTGCSNIHIHHINCSPGHG
ISIGGLGKGNSLACVSNVTVDSINVQNALSGVRIKTWQGGLGSVRNVIFSDVRVSNVEIP
VVIDQYYCNKKACKNKTDAVAVSGVMYKRITGTYSYQPMHLACSDSSPCTGIKLTDIRLS
PVNASQFQQDAFCWKSYGESQGPLEPLSIGCLQRTSRSIKPLIKSSNHTC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatagaagtctcttgcttgtttttcatgtacttctttggttggttctttctaac
acatttcctatgctatcagcagtgacaagtcacagaaagcaaagcagagttcataagcat
gaaggaagtaaagatggcagacatgaccatgattttgatcattttaatagttcttccact
tcctcagctcaccataatggtttctataagccacattcaaagatttttgatgttatatct
tttggagccatgggagatggaatttctgacgactccaaggcacttaaatcagcatggaaa
gctgcttgcttgattcctggagcaactgtgaagattccatcagagttcagatttctcatc
agaccagtcactctccaaggcccttgcatgcctcacctaaacctccagatagatggggac
atcatagcacctaccggtgtggctgcctggcccaaatcaaatctcttccaatggatgaac
ttgaagtggcttaatgatttcaccatccaaggacgtggcacatttgatggtcaaggctct
acattctggaatttctctcaaagccgacacacacagaaagaaatcaaacatcagtccctt
aagatgagaccaactgcagtgagattctacaagagttacaatgtcacagttcgtggtgtc
caaatcatcaatagccctcaatgccacctgaagtttgatagctctcagggtatcaaagtg
aaaaacatcaccatctcttctcccgaagatagccccaacactgatggcattcaccttcaa
aacacacatgatgttgaaatcaagcattctaacattggatgtggtgatgattgtgtatca
atacaaactggatgctcaaatattcacatacaccatatcaactgcagcccaggccatgga
atcagcataggaggactcgggaaaggcaatagcctagcctgtgtctccaatgtcactgtt
gatagcatcaatgttcaaaatgctctgtctggagtaaggatcaaaacatggcagggaggt
ctaggatctgtcaggaatgtcatattttccgatgttcgagtctccaatgttgagatccca
gttgtgattgatcagtattactgcaacaagaaggcatgcaagaacaagactgatgcagtg
gctgtttcaggagtcatgtacaaaaggataaccgggacatattcataccaaccaatgcat
cttgcttgcagtgacagcagtccatgcacgggcatcaaattgactgatatccggctatca
ccagttaatgcatctcaatttcagcaggacgccttctgctggaagtcatatggggagtca
caaggtcctcttgagcctttaagcattggttgcttgcaaaggaccagtaggtccatcaag
cccctaataaagtcatccaatcacacttgctag
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