Elaeis guineensis (African oil palm): 105047940
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Entry
105047940 CDS
T03921
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105047940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egu03041
]
105047940
Enzymes [BR:
egu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105047940
Spliceosome [BR:
egu03041
]
Complex A
U2 snRNP components
U2 related factors
105047940
Complex B
105047940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
APH
Motif
Other DBs
NCBI-GeneID:
105047940
NCBI-ProteinID:
XP_019707356
UniProt:
A0A8N4EY71
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Position
7:2785229..2792535
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AA seq
895 aa
AA seq
DB search
MEKRRRRVQEWQELRRKKEEQEREKLGGANAEEQPKSGKNWTLEGESDDEEAVPAKTDKD
MAIDEDSKLKDGDGDAMPVDSINGVAMPDGAEGSNDGEEEIDPLDAFMNSMVLPEVEKLQ
NAKIAVKTDDKKAGSEKASKEIIVGNGDQSRKGAKNSVGRIIPGEDSDSDYEDLENDEVA
LEDEDDEEFMKRVKKTKAEKLSIVDHSKIQYLPFRKNFYIEAKEISRMTAEEVAAYRKQL
ELKMHGKDVPKPIKTWSQTGLSSKILDTIKKLNFEKPMPIQVQALPIIMSGRDCIGIAKT
GSGKTLAFVLPMLRHIKDQPPVVPGDGPVGLIMAPTRELVQQIHTDIKKFTKVLGINCVP
VYGGSGVAQQISDLKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMG
FEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVE
VRPESDRFLRLLEILGEWYEKGKILIFVHTQDKCDALLRDLFKHGYPCLSLHGAKDQTDR
ESTISDFKSNVCNLLVATSVAARGLDVKELELVVNFDVPNHYEDYVHRVGRTGRAGRKGC
AITFITEEDARYAPDLVKALELSEQAVPADLKALADSFMTKVRQGTEHAHGTGYGGSGFK
FNEEEDEARKAAKKAQAREYGFEEDKSDSDSEDEGIRKAGADLSQAFANAQAAALAAASK
VPITSMPAPVSAAQLLSTAGLPAVTLPGMPGLPISATLPVTASHTEAAARAAALAAAMNL
QHNLAKIQADAMPEHYEAELEINDFPQNARWKITHKETLGPISEWTGAAITTRGQYYPPG
KIPGPGERKLYLFIEGPTESSVKKAKAEVKRVLEDYTAQALSLPGAAQQGKYSVL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcggcgccgtagggttcaggagtggcaggagcttagaaggaagaaagaggaa
caggaaagagaaaaactgggtggggccaatgctgaggaacaacccaagtctggtaaaaat
tggaccttggagggtgaatctgatgatgaagaagcagtccctgcaaagactgataaggat
atggccatcgatgaagattcaaagctgaaagatggggacggtgatgccatgccagtagac
tcgattaatggtgttgccatgcctgatggtgctgagggttctaatgatggtgaggaggaa
attgacccacttgatgctttcatgaactcaatggtattgcctgaagttgagaagctgcag
aatgccaagattgctgtcaagactgatgataagaaagctggctcagaaaaggcctccaaa
gaaatcattgtcggtaatggtgatcaatccagaaagggtgcaaagaacagtgtgggaagg
ataattcctggtgaagattctgactctgattatgaggatcttgagaatgatgaagttgca
cttgaagatgaagatgatgaagaattcatgaaaagggtgaagaaaaccaaggctgagaag
ttatcaattgtcgatcactcaaagattcagtatctgccattcaggaaaaatttctatatc
gaagcaaaagaaatctcaaggatgacagctgaggaagttgcagcctatagaaaacagctt
gaattgaagatgcatgggaaggatgtgccaaagcctatcaaaacatggagtcagactgga
ttatcaagcaaaattctggatacaatcaagaagcttaattttgaaaaaccgatgcccatt
caagtccaggcgctccctatcatcatgagcgggcgagattgcataggaattgctaaaact
ggttcaggtaaaacactcgcttttgttttgcccatgctgagacatattaaagaccagcct
ccagtggtgcctggggatggtcctgttgggcttattatggctcctacgagggagcttgtt
caacagattcacactgatattaagaagttcactaaggttctaggcattaactgtgtgcca
gtgtatggaggctcaggtgttgctcagcagattagtgatctaaagcgaggtgctgaaatt
gttgtctgcactcctggtaggatgatagatatactctgtacgagtagtggaaaaattact
aacctccgcagggtcacttacttggtgatggacgaggctgataggatgtttgacatgggc
tttgaacctcagattaccaggattgttcaaaatacacggcctgaccgtcagacagtttta
ttttctgctacatttcctcggcaggtggagatattggcacgcaaggtgttgaacaagcct
gtcgagatccaggttgggggaaggagtgtcgtgaacaaggatataactcaattggtcgag
gttagacctgaaagcgacaggtttttgaggctattggagattttgggagagtggtatgag
aaggggaagatccttatttttgttcatacgcaagacaaatgtgatgctctactgagggat
ttattcaagcatggttatccttgcctctcgcttcacggggccaaggatcagactgaccgt
gagtctactatctctgattttaagagcaatgtctgtaacctgctggtagctacaagtgtt
gctgccagaggtttagatgtgaaggagcttgagctggttgtgaactttgatgtcccaaac
cactacgaagattatgttcaccgtgttggccggacaggtcgggcaggcagaaagggttgt
gccatcacattcattaccgaggaagatgcacgttatgcaccagatcttgtaaaagccttg
gaactttctgaacaagctgttcctgcagatctaaaggcactggctgattcattcatgaca
aaggtgcgccagggaacagaacatgcccatggcactggctatggtggaagtggtttcaag
tttaatgaagaggaagatgaagcaaggaaggctgctaaaaaagctcaggcaagagaatat
ggatttgaggaagataaatcagattcagactctgaagatgagggaattcggaaggcagga
gctgatctttcacaggcttttgctaatgcccaagctgctgcattagctgctgcttcaaag
gtacctattacttcgatgcctgctccagtttctgcggctcaattactctctactgctggt
ctgcctgctgtcactcttcctggaatgcctggtctacctatctctgcaactctacctgta
actgcttcacacactgaggctgctgctagggcagctgcgctggctgctgccatgaatcta
cagcacaatttggcaaagatacaagctgatgccatgcctgaacactatgaagcagaattg
gagatcaatgatttcccacaaaatgctcgctggaagatcacccataaagagaccttaggt
ccaatctcagaatggactggagctgctattactaccaggggccagtactatcctccaggt
aagattcctggtccgggagaacgcaaactttacctgtttattgaaggccccactgagtct
tctgtgaagaaggctaaagctgaagtgaaacgggtactggaggattacacggctcaggct
ctttctcttcctggtgctgcccaacaaggcaagtactctgttctttag
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