KEGG   Elaeis guineensis (African oil palm): 105056420
Entry
105056420         CDS       T03921                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105056420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egu03041]
    105056420
Spliceosome [BR:egu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    105056420
 Complex B
    105056420
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 105056420
NCBI-ProteinID: XP_010936910
UniProt: A0A6I9S3B7
LinkDB
Position
1:complement(39180983..39195351)
AA seq 542 aa
MPGYGDSKSESNTHEHERGSSKSRDRERDKGREKDRGRERDRERDEGRERDRERDRDRDR
DRHHRDHRDRSERREHSRGKSDDHDHYRNRDHERFRDYDRDRDEYDIHRSQSQSRGRSHH
RSRSRGRSDHRSRSRSRSRSKSKRISGFDMPPAATMIPAAVVAGQMTGATSASPGIFPNM
FPSTPGQLSALSLMPYQAMTQQATRHARRVYVGGLSPTANEQSVAAFFNQVMAAIGGNTA
GPGDAVVNVYINHEKMFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPTDYNPALAATL
GPSQPNPNLNLAAVGLTPGSGGVLEGPDRIFVGGIPHFLTEEKIRELLEMFGPLRGFNLV
KDRETGNSKGYAFCIYQDLAVTDIACAALNGIKMGDKTLTVRRANQGLTQPRPEQENLLL
QAQQQVALQKLAFQMAPLPTKVVCLKQAVSEDELTNDEEFEDIVEDMRCEGEKYGKLVNV
VIPRPGPNGESSPGVGKVFLEYADTEGSTKARQGMNGRKFGGKEVVAIFYPESKFAQGEY
DG
NT seq 1629 nt   +upstreamnt  +downstreamnt
atgccgggctacggagactccaagtccgagagcaatactcatgagcatgaaagaggttct
tcgaaaagcagagacagggagagagataaggggagggagaaggatagaggacgagaacgg
gacagggaacgtgatgagggaagggagagagatagggaacgagatagggatagggaccgt
gatcgtcatcacagggatcatagggatcgaagtgaaaggagggagcacagccgcgggaaa
tctgatgatcatgatcattaccgtaaccgagatcatgaaaggtttagggattacgacaga
gacagagatgagtacgatatacatcggtctcaatctcagtcgaggggtagatctcatcat
agatctcggtcgagaggtagatctgatcatagatcgaggtctcgttcccgctcaaggtca
aagagcaaacgtatcagtggttttgacatgccacctgcagctactatgatacctgctgca
gtcgttgcaggtcagatgacaggggccacaagtgctagtcctgggatttttccaaacatg
tttccatcaacacctggacagttgtcagctctctctttgatgccttatcaggcaatgacg
caacaggcaactagacatgctcggcgtgtttatgttggaggcctttctcctactgctaac
gagcagtcggttgctgccttttttaaccaggttatggcagcaattggaggaaacactgct
gggccaggtgatgctgttgttaatgtgtatataaatcatgagaagatgtttgcttttgtt
gaaatgaggtcggtagaagaagcaagcaatgcgatggccttggatggcatcatatttgag
ggagcacctgtgaaagtgagaaggcccactgattacaaccctgctcttgctgctacactc
ggcccaagccaacccaatcccaatcttaaccttgctgcagttgggcttacaccaggttct
ggtggtgtgcttgagggtcctgatcgtatatttgtgggtgggattccacactttcttaca
gaagaaaagatacgagagttgcttgagatgtttggtcctcttcgaggttttaatcttgtc
aaggacagggaaactggtaactcaaagggctatgccttctgtatttaccaggacctcgca
gtcacagacattgcatgtgcagcacttaatggcatcaaaatgggagataaaactcttact
gttagacgtgcaaaccaaggtttaacccagcctaggcctgaacaagaaaatttgttacta
caggctcaacagcaagtggcattgcagaagcttgctttccaaatggcaccccttccaacc
aaggtagtatgcttaaagcaggcggtgagtgaagatgaattgacaaatgatgaagaattt
gaagatattgtagaagacatgagatgtgaaggcgagaaatatggtaagctggtaaatgtt
gtcatccctcgaccaggtccaaatggagaatcatctcctggagttggaaaggtattcttg
gaatatgctgacacagaaggatctaccaaagccaggcagggcatgaatggcaggaaattt
gggggcaaagaagttgttgccatcttttatccagagagcaagtttgcccaaggagaatat
gacggctag

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