Elaeis guineensis (African oil palm): 105059003
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Entry
105059003 CDS
T03921
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03022
Basal transcription factors
egu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105059003
09124 Replication and repair
03420 Nucleotide excision repair
105059003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105059003
03400 DNA repair and recombination proteins [BR:
egu03400
]
105059003
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105059003
DNA repair and recombination proteins [BR:
egu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105059003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
105059003
NCBI-ProteinID:
XP_010940415
UniProt:
A0A6I9SBI4
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Position
16:complement(3248243..3260791)
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AA seq
451 aa
AA seq
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MPEVRIVAKNFMDMVAALPAMKLDKLYGSTFICEAVLRSLPPLAKKYVLQMLFVDSPVTA
KSMEEWLLADGYSKHKVSIDRLLQLRVFLEVNDRKKETSYKMNTKFQSNMQKYLVFGGTL
PREPMPLSVTVRLPTLEDLEAYALEQWECFLLQLINSAQAERLTSFSSSLMRVFQRGLLS
ARENEAPKLTENGFQFLLMDTNAQLWYIIREYISSSEDRGVDPTDLICFLLELSFHTLGE
AYNLNTLTDVQKHAIKDLADLGLVKLQQGRKESWFIPTKLATNLSVSLSDSSSRKEGFVV
VETNFRMYAYSSSKLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFENGITAEQIISFL
QQNVHPRVATKTPAVPENVTDQIRLWETDRNRVEMIPSHLYEDFPSKDIFEAVCDFAREI
GGLLWEDSKKMRLVVRGEYHQHMRDFLRHQK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggtgcggattgtggcgaagaatttcatggacatggtggcagcactgccggcc
atgaaactcgacaagctctatggcagcaccttcatctgtgaagccgtcctcaggtctttg
cctcctctggctaagaagtatgttttgcaaatgctattcgttgattcccctgtaacagcc
aagtcaatggaagaatggctccttgccgatggatattccaagcacaaagtgtcaattgat
cggttacttcagctgagagtcttccttgaagtcaatgatagaaaaaaggagaccagttac
aagatgaacacgaagttccagagtaatatgcaaaaatacttggtatttggtggaacttta
ccgagagagccaatgcccttaagtgtcactgtgagattgccaacgttggaggatctagag
gcctacgctctagaacaatgggagtgcttcttgttgcaacttataaactcagctcaagcg
gaaagattaacaagcttcagttcatcattgatgagagttttccagcgaggacttttgagc
gcaagggaaaatgaagctccaaagttaacagagaatggcttccagttccttctgatggat
acaaatgcacaactttggtacataataagggaatatatctcttcctctgaggatcgtgga
gtggatccaacggatttaatatgctttctcctagagcttagttttcatacccttggagag
gcatataatttaaataccctaactgatgttcaaaaacatgctatcaaagaccttgcagac
ctgggattagtcaaacttcaacagggaagaaaggaaagttggttcatacctactaagttg
gctactaatctttcagtgagcctatcagattcatcatcacgcaaagagggttttgtagtt
gtggagacaaacttcaggatgtatgcctactcttcatcgaaattacactgtgagattcta
cgcctcttttcaaggattgaatatcaacttcctaacctgattgttggagctataacaaaa
gaaagtctctataatgcttttgagaatggcattactgcagagcagattatttctttcctt
cagcagaatgttcatcctcgggtcgcaacaaagacaccagcagtcccagagaacgtcaca
gatcagattagattgtgggaaactgatcgaaatagggttgagatgattccttcacatctt
tatgaagattttccatcaaaggacatctttgaagcagtatgcgactttgcaagggagatt
gggggattgctgtgggaagattcaaagaagatgaggttagttgtccgaggggaataccac
caacacatgcgagattttcttcgtcatcaaaagtaa
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