Elaeis guineensis (African oil palm): 105060806
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Entry
105060806 CDS
T03921
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
egu
Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egu03016
]
105060806
Enzymes [BR:
egu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
105060806
Transfer RNA biogenesis [BR:
egu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105060806
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
105060806
NCBI-ProteinID:
XP_010942945
UniProt:
A0A6I9SFM0
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Position
1:59044037..59058292
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AA seq
647 aa
AA seq
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MMATSHSVSLPSRLALFALLSLSSSFFLWKSRRLRRLRLSSQNPNPDPSPRGKLFFASQT
GTSRALAGRLAERLHAAGFPFDLVDPRGYEPEDLPKETLVLIVASTWEDGKPPPNAEFLA
RWLAESAEDFRVGSLLLSRCRFAVFGVGSRSYGETFNATAKDFSRWMRAVGATEMLPIWE
GDVDNGDVDEVFDSWSQNVIGLLKGDVRENGGHLASTLEINGFDSVEVEEEEEEAMESAV
VDMEDIAGKAPSRKSTGALSNGGQNGDNGLREMVTPIIRTSLEKQGYKIIGSHSGVKLCR
WTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWRWKMDDP
LVIVNAAIDQHTKMIKQMKGVPGVKQEQLLEGLSPRHCALSLVGEPIMYPEINSLIDELH
SRHISTFLVTNAQFPDRIKMLRSVTQLYVSVDAATKDSLKAIDRPLFSDFWERFVDSLKA
LQDKEQRTVYRLTLVKGWNAEDIDAYANLLGIGKPDLVEIKGVTYCGSSATSKLTMENVP
WHSDVKAFSEALAVKSSGEYEVACEHVHSCCVLLAKASKFKVKGQWFTWIDYERFHELVA
SGKPFKSEDYMALTPSWAVYGAEEGGFDPDQSRCKKERRHGAASIRG
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgatggccacctcccactccgtctccctcccttctcgcctcgccctcttcgccctcctc
tccctctcctcctctttcttcctctggaaatcccgccgtctccgccgcctccgcctctcc
tcccaaaaccctaaccccgatcccagtccgaggggaaagctcttcttcgcctcacagacc
ggaacctcccgagccctcgccggccgcctcgccgaacgcctccacgccgctggcttcccc
ttcgacctcgtcgacccccgcggctacgagccggaggacctccctaaagaaaccctagtt
cttatcgtcgcttcgacctgggaggacgggaagcccccgcctaatgccgagttcctcgcc
cggtggctcgccgagagcgccgaggacttccgggtgggctccctgctcctctcccggtgc
cgcttcgcggtattcggtgttgggtcgaggtcttatggtgagacctttaatgccaccgcg
aaggacttctcaaggtggatgagggccgtcggagccacggagatgctgcctatttgggag
ggggatgtggacaatggagacgtggatgaagttttcgattcctggagtcagaacgttatc
gggttactgaagggtgacgtgcgggagaacggtgggcacttggcttctactctggagatc
aatggcttcgattcggtagaggtggaggaggaggaggaggaggccatggaatcagctgtt
gttgatatggaggacatcgctggtaaagctccttcgaggaaatcaactggggctttatct
aatggagggcaaaatggtgacaatggtctgagagaaatggtgacgccgatcattagaaca
agcttagagaagcagggatataaaattatcggttcacatagtggagttaaactttgcagg
tggaccaagtcacaactccgaggtcgtggtggttgttacaagcattcattttatggcata
gagagtcataggtgcatggaagcaaccccaagtctggcttgtgcaaataaatgtgttttc
tgttggaggcatcatacaaatcctgttggaaagagctggcgatggaagatggatgatcct
ttagtaattgtcaatgctgccatagaccagcatactaaaatgattaagcaaatgaaaggt
gtcccaggtgtaaagcaggaacagttattagaaggtctctctcctaggcattgtgcttta
tctctggttggtgaaccaatcatgtatccagagataaattcacttattgatgagctgcat
tctaggcatatctctaccttccttgtcacaaatgcacaatttccagataggataaagatg
ctgagatctgttactcagttatatgtgagtgtagatgcggctacaaaagacagcctgaaa
gcaattgataggccactgtttagtgacttctgggagcgttttgttgattcgttaaaagct
ttgcaagacaaagaacagcgaacagtttaccgtttaactttagttaaaggatggaatgcg
gaagatatagatgcatatgcgaacttgctgggcattggaaaaccagatttagttgaaatc
aaaggcgtcacatactgtggctcgtctgccacttcaaaattgacaatggagaatgtcccc
tggcactctgacgttaaggccttctcagaggctttggcggttaaaagcagtggtgaatat
gaggttgcttgtgagcatgtccactcctgctgcgttcttctagcaaaagctagcaagttt
aaggtcaagggtcaatggtttacatggatagattatgaacggttccatgagctggttgct
tctgggaagccttttaaaagtgaagactacatggccctgacaccttcctgggctgtctat
ggcgctgaggaaggtggatttgatccagatcaatctcgttgtaaaaaggagaggcgccat
ggagctgcaagcattagaggctag
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