Egretta garzetta (little egret): 104127176
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Entry
104127176 CDS
T05152
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
egz
Egretta garzetta (little egret)
Brite
KEGG Orthology (KO) [BR:
egz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egz03041
]
104127176 (DDX1)
03016 Transfer RNA biogenesis [BR:
egz03016
]
104127176 (DDX1)
Enzymes [BR:
egz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104127176 (DDX1)
Spliceosome [BR:
egz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104127176 (DDX1)
Transfer RNA biogenesis [BR:
egz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104127176 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104127176
NCBI-ProteinID:
XP_009638119
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATR
GVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEF
TMHDTIGCYLDLDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKFNFGEED
FKFPPKDGYIGLCKAPDGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGANTPEMWS
EAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIVQGGGPDRKGHQFSCVCLH
GDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV
GRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLGEIEEHL
NCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEKEAQTSF
LHLGYLPNQLFRTF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttatgcctgagatagctcaagcagtggaggagatggactggcttcttcctacg
gatatccaagcagaatccatcccactgatcctgggaggtggtgatgtacttatggctgct
gaaacagggagtggaaaaactggtgcttttagtattccagttatccagattgtttatgaa
acactgaaggaccagatggaaggcaagaaagggaaagcaactattaaaactggtggggca
gtgctcaataaatggcagatgaatccatatgatagaggatcagcttttgcaattggatca
gatggtttgtgttgtcaaagcagagaggtaaaagaatggcatggatgcagagcgactaga
ggcgtgactaaaggtaaatactactatgaagtttcctgtcatgaccaaggcttgtgcaga
gttggttggtcaactatgcaggcttcactagatttgggcactgataaatttggctttggc
tttggaggcactggtaagaaatctcacaacaaacaatttgacagctatggtgaggaattc
actatgcatgatacaattgggtgttatctagacctagataaaggacaaataaaattttcc
aaaaatgggaaggaccttggccttgcgtttgaaatcccaccgcacataaggaaccaagca
ctttttgccgcttgtgtactgaagaatgctgaattgaaattcaattttggtgaagaagac
ttcaagtttccaccaaaagatggctatattggtctttgcaaggctcctgatggtagtgtt
gtaaaatcacaacactcaggaaatgcacaagtggttcaaacacagaaccttccaaatgct
ccaaaagcattgattgtagaaccgtcaagagagcttgcagaacaaactttgaacaatgtg
aagcagttcaaaaaatatgtcgataatcccaaattaagagaactgttgattattggtggg
gttgctgcaagagatcaactctctgtactggaacaaggagtggatattgtcgttggaact
cctggaagactggatgacctggtctcaacaggaaagcttaatttgtctcaagttagattc
ctggttctggatgaagctgatggccttctcctccaaggttattcagatttcataaacagg
atccacagtcaaattcctcagataacttcagatggaaagagacttcaggtgattgtgtgc
tctgcaacactacattcttttgacgtgaaaaaactatctgaaaagatcatgcattttccc
acgtgggttgatttgaaaggagaagattctgtccctgaaactgtacaccatgtagttgtg
cccgtaaatccaaaagctgacaaactctgggaaaggcttggcaagaatcatatcagaact
gatgaagtacatgcaaaagacaatacacgacctggtgctaacactccagaaatgtggtct
gaagctattaaaattctaaaaggagaatacaccgttcgggcaatcaaagaacacaagatg
gaccaagccattattttctgcaggactaaaatagactgtgataatatggagcagtacttc
atcgtacagggcggaggccctgataggaagggacatcaattttcatgtgtctgtctgcat
ggtgacagaaaacctcaagaaagaaagcaaaacctggaaagatttaagagaggagatgtc
cgtttcttgatctgcacggatgttgctgctagaggaattgatattcatggtgttccgtat
gttatcaacgtcacactccctgatgaaaaacagaactatgttcatcgaattgggagagta
ggcagagctgagaggatgggtctggcaatctcccttgtggcaaaagagaaagaaaaggtt
tggtaccatgtatgcagtagtcgtggaaaagggtgttataatactagactgaaggaagaa
ggaggttgtactatatggtacaatgagatgcagttgctgggagagattgaagaacactta
aactgcactattgcgcaagttgaaccagacataaaagtaccagtagacgattttgatggg
aaagttacatatgggcagaagagagctctgggtggtgggctgtataaaggccacgtggat
attctggcacctacagttcaagagttggctgcccttgaaaaggaggctcagacatctttc
ttgcatcttggctatcttcctaaccagctgttcagaacattctga
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